BLASTX nr result

ID: Glycyrrhiza24_contig00030446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030446
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626921.1| NBS-containing resistance-like protein [Medi...   117   7e-25
ref|XP_003627261.1| Resistance protein [Medicago truncatula] gi|...   116   2e-24
ref|XP_003626928.1| NBS-containing resistance-like protein [Medi...   116   2e-24
ref|XP_003613401.1| NBS-containing resistance-like protein [Medi...   115   4e-24
ref|XP_003598881.1| TMV resistance protein N [Medicago truncatul...   114   8e-24

>ref|XP_003626921.1| NBS-containing resistance-like protein [Medicago truncatula]
            gi|355520943|gb|AET01397.1| NBS-containing
            resistance-like protein [Medicago truncatula]
          Length = 2300

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/79 (73%), Positives = 67/79 (84%), Gaps = 2/79 (2%)
 Frame = +3

Query: 3    QISDLSLRSLLIGIGNCHTVLDTLGKSISQVLTTN--DSFLPGDNYPSWLAYTCEGPSVL 176
            QIS+L++RSLL GIG+CH V++TL KS+SQ L TN  DSFLPGDNYPSWLAY  EGPSVL
Sbjct: 2020 QISNLTMRSLLFGIGSCHIVINTLRKSLSQGLATNFGDSFLPGDNYPSWLAYKGEGPSVL 2079

Query: 177  FQVPEDSDPYMKGLALCVV 233
            FQVPED D  MKG+ALCV+
Sbjct: 2080 FQVPEDRDSCMKGIALCVL 2098


>ref|XP_003627261.1| Resistance protein [Medicago truncatula] gi|355521283|gb|AET01737.1|
            Resistance protein [Medicago truncatula]
          Length = 961

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 3/80 (3%)
 Frame = +3

Query: 3    QISDLSLRSLLIGIGNCHTVLDTLGKSISQVLTTN---DSFLPGDNYPSWLAYTCEGPSV 173
            +IS+LSLRSLLIG+G+CH ++DT GKSISQ LTTN   D F+PG NYPSWLAYT EGPS 
Sbjct: 807  EISNLSLRSLLIGMGSCHIIIDTRGKSISQGLTTNGSSDFFIPGGNYPSWLAYTGEGPSA 866

Query: 174  LFQVPEDSDPYMKGLALCVV 233
            LFQVP D D +MKG+ LCVV
Sbjct: 867  LFQVPRDIDRHMKGIILCVV 886


>ref|XP_003626928.1| NBS-containing resistance-like protein [Medicago truncatula]
            gi|355520950|gb|AET01404.1| NBS-containing
            resistance-like protein [Medicago truncatula]
          Length = 1087

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/78 (73%), Positives = 67/78 (85%), Gaps = 2/78 (2%)
 Frame = +3

Query: 6    ISDLSLRSLLIGIGNCHTVLDTLGKSISQVLTTN--DSFLPGDNYPSWLAYTCEGPSVLF 179
            ISD SLRSLLIG+GNCH V++ LGKS+SQ LTTN  D+FLPGDNYPSWLAY  EGPSVLF
Sbjct: 843  ISDHSLRSLLIGMGNCHIVINILGKSLSQGLTTNSRDNFLPGDNYPSWLAYRGEGPSVLF 902

Query: 180  QVPEDSDPYMKGLALCVV 233
            QVP+D++  MKG+ LCV+
Sbjct: 903  QVPDDTNYCMKGMTLCVL 920


>ref|XP_003613401.1| NBS-containing resistance-like protein [Medicago truncatula]
           gi|355514736|gb|AES96359.1| NBS-containing
           resistance-like protein [Medicago truncatula]
          Length = 976

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/79 (74%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
 Frame = +3

Query: 3   QISDLSLRSLLIGIGNCHTVLDTLGKSISQVLTTN--DSFLPGDNYPSWLAYTCEGPSVL 176
           QISDL +RSLL GIG+CH V++TLGKS+S+ LTTN  DS LPGDNYPSWLAY  EGPSVL
Sbjct: 701 QISDLFMRSLLFGIGSCHIVINTLGKSLSRGLTTNLGDS-LPGDNYPSWLAYKGEGPSVL 759

Query: 177 FQVPEDSDPYMKGLALCVV 233
           FQVP+DSD  MKG+ALCV+
Sbjct: 760 FQVPKDSDSCMKGIALCVL 778


>ref|XP_003598881.1| TMV resistance protein N [Medicago truncatula]
            gi|355487929|gb|AES69132.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1270

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 3/80 (3%)
 Frame = +3

Query: 3    QISDLSLRSLLIGIGNCHTVLDTLGKSISQVLTTNDS---FLPGDNYPSWLAYTCEGPSV 173
            +ISD+SL+SLLI +G+CH V+DTLGKS+SQ LTTNDS   FLPGDNYPSWLAYT EGPSV
Sbjct: 963  KISDISLKSLLITMGSCHIVVDTLGKSLSQGLTTNDSSDSFLPGDNYPSWLAYTNEGPSV 1022

Query: 174  LFQVPEDSDPYMKGLALCVV 233
             F+VPED D  +KG+ L VV
Sbjct: 1023 RFEVPEDCDGCLKGITLYVV 1042


Top