BLASTX nr result

ID: Glycyrrhiza24_contig00030439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030439
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530889.1| PREDICTED: uncharacterized protein LOC100793...    88   6e-16
ref|XP_003623038.1| WD repeat-containing protein [Medicago trunc...    86   4e-15
ref|XP_002527721.1| WD-repeat protein, putative [Ricinus communi...    64   1e-08
ref|XP_002309053.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_003551457.1| PREDICTED: uncharacterized protein LOC100782...    57   2e-06

>ref|XP_003530889.1| PREDICTED: uncharacterized protein LOC100793299 [Glycine max]
          Length = 905

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/72 (66%), Positives = 55/72 (76%)
 Frame = -3

Query: 307 ISRTDSGIGDSFANNSKSMSPPLPKKGNHQATKSDCSPMEEDLEAISRTDSGLGDSFCSG 128
           ISRT+SGIGDSF N SK M PPLPKK N+ AT+S  SP++E+LEAISRTD+GLGDSF S 
Sbjct: 773 ISRTESGIGDSFGN-SKRMLPPLPKKSNNHATESGDSPIDEELEAISRTDTGLGDSFASS 831

Query: 127 SASIRYGDSPSI 92
                YGD  SI
Sbjct: 832 -----YGDPASI 838



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/43 (62%), Positives = 31/43 (72%)
 Frame = -3

Query: 265 NSKSMSPPLPKKGNHQATKSDCSPMEEDLEAISRTDSGLGDSF 137
           NSK M PPLPKK N+ AT+S     E D  AISRT+SG+GDSF
Sbjct: 742 NSKRMLPPLPKKSNNHATESAPGSPEHDPAAISRTESGIGDSF 784


>ref|XP_003623038.1| WD repeat-containing protein [Medicago truncatula]
            gi|358345001|ref|XP_003636573.1| WD repeat-containing
            protein [Medicago truncatula] gi|355498053|gb|AES79256.1|
            WD repeat-containing protein [Medicago truncatula]
            gi|355502508|gb|AES83711.1| WD repeat-containing protein
            [Medicago truncatula]
          Length = 1049

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/72 (65%), Positives = 57/72 (79%)
 Frame = -3

Query: 307  ISRTDSGIGDSFANNSKSMSPPLPKKGNHQATKSDCSPMEEDLEAISRTDSGLGDSFCSG 128
            +SR++SGIGDSF  NSK M PPLPKK N+Q T+S+   +EED  AISRT+SG GDSF S 
Sbjct: 816  LSRSESGIGDSF-ENSKRMLPPLPKKTNNQVTESE---VEEDHGAISRTNSGFGDSFSSD 871

Query: 127  SASIRYGDSPSI 92
            SASIRYGD+ S+
Sbjct: 872  SASIRYGDALSM 883


>ref|XP_002527721.1| WD-repeat protein, putative [Ricinus communis]
            gi|223532862|gb|EEF34634.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 939

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/65 (56%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
 Frame = -3

Query: 271  ANNSKSMSPPLPKKGNHQATKSD----CSPMEEDLEAISRTDSGLGDSF-CSGSASIRYG 107
            A NSK + PPLPKK N+    ++        EED  AISR+DSG GDSF  S S+SIRYG
Sbjct: 811  AANSKRLLPPLPKKNNNHHNNTNNVERAPSPEEDPSAISRSDSGFGDSFSTSASSSIRYG 870

Query: 106  DSPSI 92
            DSPSI
Sbjct: 871  DSPSI 875


>ref|XP_002309053.1| predicted protein [Populus trichocarpa] gi|222855029|gb|EEE92576.1|
           predicted protein [Populus trichocarpa]
          Length = 939

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/63 (52%), Positives = 41/63 (65%)
 Frame = -3

Query: 280 DSFANNSKSMSPPLPKKGNHQATKSDCSPMEEDLEAISRTDSGLGDSFCSGSASIRYGDS 101
           +S   NSK   PPLP+K +   + +   P EE L  IS +DSGLG+ F S S+SIRYGDS
Sbjct: 816 NSPVKNSKRQLPPLPRKNSIDTSHT---PPEEYLSLISHSDSGLGELFASSSSSIRYGDS 872

Query: 100 PSI 92
           PSI
Sbjct: 873 PSI 875


>ref|XP_003551457.1| PREDICTED: uncharacterized protein LOC100782200 [Glycine max]
          Length = 887

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/61 (54%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = -3

Query: 271 ANNSKSMSPPLPKKGNHQATKSDCSPMEEDLEAISRTDSGLGDSF-CSGSASIRYGDSPS 95
           A NSK M PPLPKK N+  T+S     E D  AIS T+SG+GDSF  S S +  YGD  S
Sbjct: 760 AANSKRMLPPLPKKSNNHTTESAPGSPEHDPAAISHTESGIGDSFGNSDSFASSYGDPAS 819

Query: 94  I 92
           I
Sbjct: 820 I 820


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