BLASTX nr result

ID: Glycyrrhiza24_contig00030399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030399
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540797.1| PREDICTED: putative phagocytic receptor 1b-l...   123   1e-26
ref|XP_003606114.1| Transmembrane 9 superfamily member [Medicago...   120   1e-25
ref|XP_003539167.1| PREDICTED: LOW QUALITY PROTEIN: transmembran...   118   6e-25
ref|XP_004172236.1| PREDICTED: LOW QUALITY PROTEIN: putative pha...   105   3e-21
ref|XP_004139482.1| PREDICTED: putative phagocytic receptor 1b-l...   105   3e-21

>ref|XP_003540797.1| PREDICTED: putative phagocytic receptor 1b-like [Glycine max]
          Length = 589

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/62 (88%), Positives = 60/62 (96%)
 Frame = -3

Query: 186 AASPSDHLYNVGDSVPFFVNKVGPFNNPSETYEYYDLPFCSPDPIVRKKESIGEVLNGDR 7
           ++SPSDHLYNVG+ VP FVNKVGPFNNPSETYEYYDLPFC+PDPIVRKKES+GEVLNGDR
Sbjct: 22  SSSPSDHLYNVGELVPLFVNKVGPFNNPSETYEYYDLPFCTPDPIVRKKESLGEVLNGDR 81

Query: 6   LS 1
           LS
Sbjct: 82  LS 83


>ref|XP_003606114.1| Transmembrane 9 superfamily member [Medicago truncatula]
           gi|355507169|gb|AES88311.1| Transmembrane 9 superfamily
           member [Medicago truncatula]
          Length = 589

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = -3

Query: 198 SRSVAASPSDHLYNVGDSVPFFVNKVGPFNNPSETYEYYDLPFCSPDPIVRKKESIGEVL 19
           S SV AS S+H+YNVGD VPFFVNKVGPFNNPSETYEYY+LPFC PDPIV+K ES+GEVL
Sbjct: 19  SSSVTASTSNHIYNVGDIVPFFVNKVGPFNNPSETYEYYELPFCKPDPIVKKIESLGEVL 78

Query: 18  NGDRLS 1
           NGDRLS
Sbjct: 79  NGDRLS 84


>ref|XP_003539167.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane 9 superfamily member
           1-like, partial [Glycine max]
          Length = 421

 Score =  118 bits (295), Expect = 6e-25
 Identities = 52/62 (83%), Positives = 59/62 (95%)
 Frame = -3

Query: 186 AASPSDHLYNVGDSVPFFVNKVGPFNNPSETYEYYDLPFCSPDPIVRKKESIGEVLNGDR 7
           ++SPS+HLY+VG+ VP FVNKVGPFNNPSETYEYYD PFC+PDPIVRKKES+GEVLNGDR
Sbjct: 1   SSSPSNHLYDVGELVPLFVNKVGPFNNPSETYEYYDFPFCTPDPIVRKKESLGEVLNGDR 60

Query: 6   LS 1
           LS
Sbjct: 61  LS 62


>ref|XP_004172236.1| PREDICTED: LOW QUALITY PROTEIN: putative phagocytic receptor
           1b-like, partial [Cucumis sativus]
          Length = 307

 Score =  105 bits (263), Expect = 3e-21
 Identities = 47/66 (71%), Positives = 54/66 (81%)
 Frame = -3

Query: 198 SRSVAASPSDHLYNVGDSVPFFVNKVGPFNNPSETYEYYDLPFCSPDPIVRKKESIGEVL 19
           SR   ASP +H YNVGD VP FVNKVGP  NPSETY+YY+LPFC PDP+V KK ++GEVL
Sbjct: 22  SRLSTASPLNHQYNVGDPVPLFVNKVGPLTNPSETYQYYELPFCRPDPVVPKKATLGEVL 81

Query: 18  NGDRLS 1
           NGDRL+
Sbjct: 82  NGDRLN 87


>ref|XP_004139482.1| PREDICTED: putative phagocytic receptor 1b-like [Cucumis sativus]
          Length = 593

 Score =  105 bits (263), Expect = 3e-21
 Identities = 47/66 (71%), Positives = 54/66 (81%)
 Frame = -3

Query: 198 SRSVAASPSDHLYNVGDSVPFFVNKVGPFNNPSETYEYYDLPFCSPDPIVRKKESIGEVL 19
           SR   ASP +H YNVGD VP FVNKVGP  NPSETY+YY+LPFC PDP+V KK ++GEVL
Sbjct: 22  SRLSTASPLNHQYNVGDPVPLFVNKVGPLTNPSETYQYYELPFCRPDPVVPKKATLGEVL 81

Query: 18  NGDRLS 1
           NGDRL+
Sbjct: 82  NGDRLN 87


Top