BLASTX nr result

ID: Glycyrrhiza24_contig00030367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030367
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520220.1| PREDICTED: putative E3 ubiquitin-protein lig...   127   9e-28
ref|XP_002889456.1| C2 domain-containing protein [Arabidopsis ly...    62   4e-08
ref|NP_192209.2| putative E3 ubiquitin-protein ligase RF298 [Ara...    61   8e-08
gb|AAC79106.1| putative inhibitor of apoptosis [Arabidopsis thal...    61   8e-08
ref|XP_003546114.1| PREDICTED: putative E3 ubiquitin-protein lig...    61   1e-07

>ref|XP_003520220.1| PREDICTED: putative E3 ubiquitin-protein ligase RF4-like [Glycine
           max]
          Length = 813

 Score =  127 bits (319), Expect = 9e-28
 Identities = 71/102 (69%), Positives = 76/102 (74%)
 Frame = -1

Query: 310 NAVKRISEMENAMENTKRQVESAASATLMXXXXXXXXXXXXXXXXLWVVKSMKSHQQALE 131
           NAVKRISEMENAMENTK+Q+ESAASATL+                LWVVKSM SHQQALE
Sbjct: 548 NAVKRISEMENAMENTKKQIESAASATLVLEAENSLLKKELDAAKLWVVKSMTSHQQALE 607

Query: 130 REQMAIKQTQSWESQKGLLRDELGREKLKLSNLQQELNKEKN 5
           REQMA+KQ Q  ESQ  LLRDEL REK KL NLQQEL+KE N
Sbjct: 608 REQMALKQAQILESQNSLLRDELEREKHKLFNLQQELHKETN 649


>ref|XP_002889456.1| C2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335298|gb|EFH65715.1| C2 domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1872

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/103 (35%), Positives = 57/103 (55%)
 Frame = -1

Query: 310 NAVKRISEMENAMENTKRQVESAASATLMXXXXXXXXXXXXXXXXLWVVKSMKSHQQALE 131
           N  KR+SEM+ A++N   Q+E A +                    +  V+S +S ++A E
Sbjct: 572 NTRKRLSEMDFALKNATSQLEKAHNTARRLELEQSLLKKEMEAAKIKAVESAESCREAKE 631

Query: 130 REQMAIKQTQSWESQKGLLRDELGREKLKLSNLQQELNKEKNR 2
           R Q ++K T SWE QK LL++EL  ++ K + LQ+E+ K KNR
Sbjct: 632 RGQRSLKDTHSWEGQKILLQEELKGQRDKAAVLQKEVTKAKNR 674


>ref|NP_192209.2| putative E3 ubiquitin-protein ligase RF298 [Arabidopsis thaliana]
           gi|42572815|ref|NP_974504.1| putative E3
           ubiquitin-protein ligase RF298 [Arabidopsis thaliana]
           gi|122229999|sp|Q0WPJ7.1|RF298_ARATH RecName:
           Full=Putative E3 ubiquitin-protein ligase RF298;
           AltName: Full=RING finger protein 298
           gi|110738035|dbj|BAF00952.1| hypothetical protein
           [Arabidopsis thaliana] gi|332656858|gb|AEE82258.1|
           putative E3 ubiquitin-protein ligase RF298 [Arabidopsis
           thaliana] gi|332656859|gb|AEE82259.1| putative E3
           ubiquitin-protein ligase RF298 [Arabidopsis thaliana]
          Length = 814

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/103 (34%), Positives = 54/103 (52%)
 Frame = -1

Query: 310 NAVKRISEMENAMENTKRQVESAASATLMXXXXXXXXXXXXXXXXLWVVKSMKSHQQALE 131
           N +KR SEME A+ N   Q+E   +                    +   +S +S ++A E
Sbjct: 530 NTIKRRSEMELALNNATNQLERTNNTIRRLELEQSLLKREREAANIRASESAESCREAKE 589

Query: 130 REQMAIKQTQSWESQKGLLRDELGREKLKLSNLQQELNKEKNR 2
           R Q  +K +QSWE QK LL++EL  ++ K++ LQQE+ K K R
Sbjct: 590 RVQRLLKNSQSWEGQKNLLQEELKSQRDKVAGLQQEVAKAKTR 632


>gb|AAC79106.1| putative inhibitor of apoptosis [Arabidopsis thaliana]
           gi|7269785|emb|CAB77785.1| putative protein [Arabidopsis
           thaliana]
          Length = 864

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/103 (34%), Positives = 54/103 (52%)
 Frame = -1

Query: 310 NAVKRISEMENAMENTKRQVESAASATLMXXXXXXXXXXXXXXXXLWVVKSMKSHQQALE 131
           N +KR SEME A+ N   Q+E   +                    +   +S +S ++A E
Sbjct: 530 NTIKRRSEMELALNNATNQLERTNNTIRRLELEQSLLKREREAANIRASESAESCREAKE 589

Query: 130 REQMAIKQTQSWESQKGLLRDELGREKLKLSNLQQELNKEKNR 2
           R Q  +K +QSWE QK LL++EL  ++ K++ LQQE+ K K R
Sbjct: 590 RVQRLLKNSQSWEGQKNLLQEELKSQRDKVAGLQQEVAKAKTR 632


>ref|XP_003546114.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
           max]
          Length = 855

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/101 (36%), Positives = 50/101 (49%)
 Frame = -1

Query: 310 NAVKRISEMENAMENTKRQVESAASATLMXXXXXXXXXXXXXXXXLWVVKSMKSHQQALE 131
           N +K+ISEMENA+     QVE   +                    L   +S  S+Q+   
Sbjct: 599 NTMKKISEMENALSKASAQVERTNADVRKFEVENAALRKEMEAAKLRAAESATSYQEVSR 658

Query: 130 REQMAIKQTQSWESQKGLLRDELGREKLKLSNLQQELNKEK 8
           RE+    + QSWE QK L ++EL  EK KL+ LQQEL + K
Sbjct: 659 REKKTQMKFQSWEKQKSLFQEELMTEKHKLAQLQQELEQAK 699


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