BLASTX nr result

ID: Glycyrrhiza24_contig00030341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030341
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                79   2e-29
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]    86   4e-15
emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera]    81   8e-14
gb|ABG22578.1| retrotransposon protein, putative, unclassified [...    72   6e-11
emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]    69   5e-10

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 79.3 bits (194), Expect(3) = 2e-29
 Identities = 36/73 (49%), Positives = 49/73 (67%)
 Frame = -1

Query: 447 QKGYRCYDPTSQKFYVSRHVIFLEHIPFYSLSSDSRNPTRSDLIRIDPFAMDIDDVNNSD 268
           +KGYRC+DP +QK YVS HV+FLEHIPF+S+ S + + T+SDLI IDPF+ D  +  +  
Sbjct: 739 KKGYRCFDPITQKLYVSHHVVFLEHIPFFSIPSTTHSLTKSDLIHIDPFSEDSGNDTSPY 798

Query: 267 VEHCRVDDDTSTG 229
           V      +   TG
Sbjct: 799 VRSICTHNSAGTG 811



 Score = 73.6 bits (179), Expect(3) = 2e-29
 Identities = 34/43 (79%), Positives = 36/43 (83%)
 Frame = -1

Query: 129  YKEAILDPLWQQAMTEELSAIHKTDT*DLVPLPPGKHAIGSHW 1
            YKEAILDPL QQAM EELSA+HKTDT DLVPLPPGK  +G  W
Sbjct: 878  YKEAILDPLGQQAMDEELSALHKTDTWDLVPLPPGKSVVGCRW 920



 Score = 21.6 bits (44), Expect(3) = 2e-29
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 209 TAYQQPPAVVDPSPRYPPRVLCLSLLP 129
           TA Q    +VDP PR   R+   + LP
Sbjct: 825 TAPQASSEIVDPPPRQSIRIRKSTKLP 851


>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 57/159 (35%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
 Frame = -1

Query: 447  QKGYRCYDPTSQKFYVSRHVIFLEHIPFYSLSSDSRNPTRSDLIRIDPF-AMDIDDVNNS 271
            QKGYRCYDP S    VSR+V+F EH  F  LS    + T S ++ I P  ++  D+  + 
Sbjct: 1858 QKGYRCYDPVSHXLRVSRNVVFWEHRLFVELSHFRSSLTNSSVLEIFPXESLVADEQIDD 1917

Query: 270  DVEHCRVDDDTST-GHDP*CPHGLPXXXXXXXXXXXXXXXXXXXXXXS--------YKEA 118
            ++ H        T   DP  P  +P                               Y+EA
Sbjct: 1918 ELPHFETGFPAPTLPEDP--PQDIPPRHSTRVRSIPPHLLDYHCYTALATLHEPQTYREA 1975

Query: 117  ILDPLWQQAMTEELSAIHKTDT*DLVPLPPGKHAIGSHW 1
              DPLWQ AM EEL A+ K  T DLVPLPPG+  +G  W
Sbjct: 1976 STDPLWQIAMKEELDALTKNHTWDLVPLPPGQSVVGCKW 2014


>emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera]
          Length = 1013

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 53/150 (35%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
 Frame = -1

Query: 447 QKGYRCYDPTSQKFYVSRHVIFLEHIPFYSLSSDSRNPTRSDLIRIDPFAMDIDDVNNSD 268
           QKGYRCYDP S +  VS +V+F EH  F  LS    + T S ++ I P    +   N  D
Sbjct: 431 QKGYRCYDPVSHRLRVSHNVVFWEHRLFVELSHFRSSLTNSSVLEIFPDESLVPSTNTFD 490

Query: 267 VE-HCRVDDDTSTGHDP*CPHGLPXXXXXXXXXXXXXXXXXXXXXXSYKEAILDPLWQQA 91
                  D   ++   P                             +Y+EA  DPLWQ A
Sbjct: 491 PPLDFSPDIFDASPRQP----------------------------QTYREASTDPLWQIA 522

Query: 90  MTEELSAIHKTDT*DLVPLPPGKHAIGSHW 1
           M EEL A+ K  T DLVPLPPG+  +G  W
Sbjct: 523 MKEELDALTKNHTWDLVPLPPGQSVVGCKW 552


>gb|ABG22578.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 836

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 45/149 (30%), Positives = 67/149 (44%)
 Frame = -1

Query: 447 QKGYRCYDPTSQKFYVSRHVIFLEHIPFYSLSSDSRNPTRSDLIRIDPFAMDIDDVNNSD 268
           QKGY+C+DP  ++ +VS  V F E  P+Y    D         ++     MD DD    +
Sbjct: 260 QKGYKCWDPIERRLFVSMDVTFREFEPYYKSKGDP-----DQFLQEFSTVMD-DDSREGE 313

Query: 267 VEHCRVDDDTSTGHDP*CPHGLPXXXXXXXXXXXXXXXXXXXXXXSYKEAILDPLWQQAM 88
           +E C   ++ +   +      +P                       +K A  DP W+ AM
Sbjct: 314 IERCDTPEENADDKNGEAVVTVPIPKD-------------------WKCAKQDPRWKDAM 354

Query: 87  TEELSAIHKTDT*DLVPLPPGKHAIGSHW 1
            EEL+A+ K +T +LV LPPGK A+G  W
Sbjct: 355 KEELNALMKNNTWELVKLPPGKRAVGCKW 383


>emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]
          Length = 2471

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 54/167 (32%), Positives = 71/167 (42%), Gaps = 18/167 (10%)
 Frame = -1

Query: 447  QKGYRCYDPTSQKFYVSRHVIFLEHIPFYSLSSDSRNPTRSDLIRIDPFAMDIDDVNNSD 268
            QKGYRCYDP S +  VS+  IF          ++S  P+ +       F+ DI DV+   
Sbjct: 1014 QKGYRCYDPVSHRLRVSQ--IF---------PNESLVPSTNTFDPPLDFSPDIFDVSPRQ 1062

Query: 267  VEHCRVDDDT----------STGHDP*CPHGLPXXXXXXXXXXXXXXXXXXXXXXS---- 130
            V   ++DD+           +   DP  P  +P                           
Sbjct: 1063 VADEQIDDELPHFETRSPAPTLPEDP--PQDIPPRHSTRVRSIPPHLLDYHCYTALATLH 1120

Query: 129  ----YKEAILDPLWQQAMTEELSAIHKTDT*DLVPLPPGKHAIGSHW 1
                Y+EA  DPLWQ AM EEL A+ K  T DLVPLPPG+  +G  W
Sbjct: 1121 EPQTYREASTDPLWQIAMKEELDALTKNHTWDLVPLPPGQSVVGCKW 1167


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