BLASTX nr result

ID: Glycyrrhiza24_contig00030326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030326
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530322.1| PREDICTED: squamosa promoter-binding-like pr...    69   5e-10
ref|XP_003589683.1| Squamosa promoter binding-like protein [Medi...    67   2e-09
ref|XP_003555217.1| PREDICTED: squamosa promoter-binding-like pr...    66   3e-09
ref|XP_004172805.1| PREDICTED: LOW QUALITY PROTEIN: squamosa pro...    59   4e-07
ref|XP_004145609.1| PREDICTED: squamosa promoter-binding-like pr...    59   4e-07

>ref|XP_003530322.1| PREDICTED: squamosa promoter-binding-like protein 14-like [Glycine
           max]
          Length = 1019

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 50/99 (50%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
 Frame = +2

Query: 86  KKRDLPYDVVRVSXXXXXXXXXXXXDSVRFVAKP------SNNNNRVSEEDET---LKLN 238
           +KRDL YD+V               DSVRF  KP      S NN+ V E +     L+L 
Sbjct: 13  RKRDLSYDIVSAGPNESWRWEW---DSVRFAGKPPPPPPLSPNNDVVFEAESVVPPLQLK 69

Query: 239 LGGGGA--NSNIN-NRGNKRVRSGSPSGTASYPMCQVDN 346
           LGG     N+NIN N  NKRVRSGSP GTASYPMCQVDN
Sbjct: 70  LGGTTRVNNNNININVSNKRVRSGSP-GTASYPMCQVDN 107


>ref|XP_003589683.1| Squamosa promoter binding-like protein [Medicago truncatula]
           gi|355478731|gb|AES59934.1| Squamosa promoter
           binding-like protein [Medicago truncatula]
          Length = 1003

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 55/120 (45%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
 Frame = +2

Query: 2   MEKVAS--LXXXXXMLV-HPFYDSPSLTANTKKRDL--PYDVVRVSXXXXXXXXXXXXDS 166
           MEKVA   L     ML  H FYDS    +NTKKRDL   YDVV +             DS
Sbjct: 1   MEKVAPPLLPLHPPMLSSHQFYDS----SNTKKRDLLSSYDVVHIPNDNWNPKEWNW-DS 55

Query: 167 VRFVAKPSNNNNRVSEEDETLKLNLGGGGANSNINNRGNKRVRSGSPSGTASYPMCQVDN 346
           +RF+   S       + +E+L LNLG  G       R NKR+RSGSP+ +ASYPMCQVDN
Sbjct: 56  IRFMTAKSTTVEP-QQVEESLNLNLGSTGLV-----RPNKRIRSGSPT-SASYPMCQVDN 108


>ref|XP_003555217.1| PREDICTED: squamosa promoter-binding-like protein 14-like [Glycine
           max]
          Length = 1009

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 48/94 (51%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
 Frame = +2

Query: 86  KKRDLPYDVVRVSXXXXXXXXXXXXDSVRFVAKP-----SNNNNRVSEEDET--LKLNLG 244
           +KRDL Y VV  +            DSVRF  KP     S N++ V EE     L+LNLG
Sbjct: 13  RKRDLSYAVVSPAPNPSWSWDW---DSVRFAGKPPPPLSSPNDDVVFEESVAPPLQLNLG 69

Query: 245 GGGANSNINNRGNKRVRSGSPSGTASYPMCQVDN 346
           G   NSN     NKRVRSGSP GT+SYPMCQVDN
Sbjct: 70  GRTNNSN----SNKRVRSGSP-GTSSYPMCQVDN 98


>ref|XP_004172805.1| PREDICTED: LOW QUALITY PROTEIN: squamosa promoter-binding-like
           protein 14-like [Cucumis sativus]
          Length = 1031

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = +2

Query: 161 DSVRFVAKPSN-NNNRVSEEDETLKLNLGGGGANSNINNRGNKRVRSGSPSGTASYPMCQ 337
           DS +F+ KPSN NN  + + D+TL+LNLGG      + ++  K+VR GSP+ + +YPMCQ
Sbjct: 54  DSSKFLTKPSNLNNTTLDDHDDTLRLNLGGRYVEDPV-SKPPKKVRPGSPA-SVTYPMCQ 111

Query: 338 VDN 346
           VDN
Sbjct: 112 VDN 114


>ref|XP_004145609.1| PREDICTED: squamosa promoter-binding-like protein 14-like [Cucumis
           sativus]
          Length = 1031

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = +2

Query: 161 DSVRFVAKPSN-NNNRVSEEDETLKLNLGGGGANSNINNRGNKRVRSGSPSGTASYPMCQ 337
           DS +F+ KPSN NN  + + D+TL+LNLGG      + ++  K+VR GSP+ + +YPMCQ
Sbjct: 54  DSSKFLTKPSNLNNTTLDDHDDTLRLNLGGRYVEDPV-SKPPKKVRPGSPA-SVTYPMCQ 111

Query: 338 VDN 346
           VDN
Sbjct: 112 VDN 114


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