BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030298
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523650.1| PREDICTED: pentatricopeptide repeat-containi...    89   5e-16
ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containi...    65   6e-09
emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]    63   2e-08
dbj|BAK61850.1| PPR containing protein [Citrus unshiu]                 60   2e-07
ref|XP_002308534.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_003523650.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 472

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/78 (57%), Positives = 53/78 (67%), Gaps = 6/78 (7%)
 Frame = -1

Query: 217 AVPFRKATVKP------SGIPNPSLVTSITFLVETLNPQNPDCEPLNNLSCPLTPSLVIQ 56
           A PFRKA  KP      + IPN SLVT IT +++ +NPQNPD  PL   S  LTP+LVI 
Sbjct: 3   AQPFRKAIAKPLCSSSTAPIPNLSLVTCITTILQNINPQNPDYSPLREFSSHLTPNLVIH 62

Query: 55  VIKNVKSPHHALYFFNWA 2
           VIKN  +P HAL+FFNWA
Sbjct: 63  VIKNQNNPQHALHFFNWA 80


>ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Vitis vinifera]
          Length = 563

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 6/61 (9%)
 Frame = -1

Query: 166 SLVTSITFLVETLNPQNP------DCEPLNNLSCPLTPSLVIQVIKNVKSPHHALYFFNW 5
           S  +SIT  ++TLNPQNP         PL+  +  L PSLVIQVIK+ K+P+HAL+FFNW
Sbjct: 77  STASSITSFLQTLNPQNPTPNSPTSISPLSQFAPFLNPSLVIQVIKSQKNPYHALFFFNW 136

Query: 4   A 2
           A
Sbjct: 137 A 137


>emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 6/61 (9%)
 Frame = -1

Query: 166 SLVTSITFLVETLNPQNP------DCEPLNNLSCPLTPSLVIQVIKNVKSPHHALYFFNW 5
           S  +SIT  ++TLNPQNP         PL+  +  L P LVIQVIK+ K+P+HAL+FFNW
Sbjct: 77  STASSITSFLQTLNPQNPTPNSPTSISPLSQFAPFLNPXLVIQVIKSQKNPYHALFFFNW 136

Query: 4   A 2
           A
Sbjct: 137 A 137


>dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
          Length = 567

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
 Frame = -1

Query: 205 RKATVKPSGIPNPS-LVTSITFLVETLNPQNPD-----CEPLNNLSCPLTPSLVIQVIKN 44
           R++    S IP+ S LVTSIT +++ LNPQNP       +PL+  S  L  ++V +VI  
Sbjct: 5   RRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYE 64

Query: 43  VKSPHHALYFFNWA 2
             +P+HAL+FFNWA
Sbjct: 65  QTNPYHALFFFNWA 78


>ref|XP_002308534.1| predicted protein [Populus trichocarpa] gi|222854510|gb|EEE92057.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
 Frame = -1

Query: 217 AVPFRKATVKPSGIPNPSLVTSITFLVETLNPQNPDCE-----PLNNLSCPLTPSLVIQV 53
           A   R  T  P      SLVT+IT  +ETLNPQNP+ +      LN  S  L  +LVI+V
Sbjct: 7   AATARTLTRHPRSSELASLVTAITSCLETLNPQNPNPKHINPTHLNQFSPHLDSNLVIEV 66

Query: 52  IKNVK-SPHHALYFFNWA 2
           IK  + +P+ AL+FFNWA
Sbjct: 67  IKEQQPNPYQALFFFNWA 84