BLASTX nr result
ID: Glycyrrhiza24_contig00030281
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00030281 (331 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788... 199 2e-49 ref|XP_003597674.1| MMS19 nucleotide excision repair protein-lik... 184 8e-45 ref|XP_003616940.1| MMS19 nucleotide excision repair protein-lik... 179 2e-43 emb|CBI36057.3| unnamed protein product [Vitis vinifera] 123 2e-26 ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ... 110 1e-22 >ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788537 [Glycine max] Length = 1135 Score = 199 bits (506), Expect = 2e-49 Identities = 93/110 (84%), Positives = 105/110 (95%) Frame = +2 Query: 2 AVFVNLSEVYVHRNLRSSEIAVQLLECYSCKLLPWIHENGGSEEFIVQFAVEIWSQAGNC 181 AVF NLS+VYVHRNLRSSEIAVQLLECYSC+LLPWIHENGGSE+F++QFAV+IWSQAGNC Sbjct: 631 AVFANLSKVYVHRNLRSSEIAVQLLECYSCQLLPWIHENGGSEDFVMQFAVDIWSQAGNC 690 Query: 182 MDFSAPFEEKGLLDAIMKAMKVSVGCCSVESQNIIIQKAYSILSSHTNFQ 331 MD S PFE KGLLDA+MKAM++SVG CSVESQN+II+KAYS+LSSHTNFQ Sbjct: 691 MDLSTPFEGKGLLDAMMKAMRLSVGSCSVESQNLIIRKAYSVLSSHTNFQ 740 >ref|XP_003597674.1| MMS19 nucleotide excision repair protein-like protein [Medicago truncatula] gi|355486722|gb|AES67925.1| MMS19 nucleotide excision repair protein-like protein [Medicago truncatula] Length = 1140 Score = 184 bits (466), Expect = 8e-45 Identities = 88/110 (80%), Positives = 99/110 (90%) Frame = +2 Query: 2 AVFVNLSEVYVHRNLRSSEIAVQLLECYSCKLLPWIHENGGSEEFIVQFAVEIWSQAGNC 181 A+F NLSEV H NL S E AVQLLECYSCKLLPWI +NGG+EEF+VQFAV+IW+QAGNC Sbjct: 628 AIFTNLSEV--HSNLTSHETAVQLLECYSCKLLPWILKNGGAEEFVVQFAVDIWNQAGNC 685 Query: 182 MDFSAPFEEKGLLDAIMKAMKVSVGCCSVESQNIIIQKAYSILSSHTNFQ 331 MDF++PFE+KGLLDA+MKAMKVSVGCCSVESQN+ IQKAYS LSSHT FQ Sbjct: 686 MDFNSPFEDKGLLDAMMKAMKVSVGCCSVESQNVTIQKAYSTLSSHTKFQ 735 >ref|XP_003616940.1| MMS19 nucleotide excision repair protein-like protein [Medicago truncatula] gi|355518275|gb|AES99898.1| MMS19 nucleotide excision repair protein-like protein [Medicago truncatula] Length = 1139 Score = 179 bits (455), Expect = 2e-43 Identities = 87/110 (79%), Positives = 98/110 (89%) Frame = +2 Query: 2 AVFVNLSEVYVHRNLRSSEIAVQLLECYSCKLLPWIHENGGSEEFIVQFAVEIWSQAGNC 181 A+F NLSEV HRNL S + AVQLLECYSCKLLPWI ENGG+EEFI+QF+V+IW+QAGNC Sbjct: 628 AIFANLSEV--HRNLTSYDTAVQLLECYSCKLLPWILENGGAEEFILQFSVDIWNQAGNC 685 Query: 182 MDFSAPFEEKGLLDAIMKAMKVSVGCCSVESQNIIIQKAYSILSSHTNFQ 331 MDF++PFEEKGLLDA MKAMK SVGCCS ESQN+II K+YSILSS TNFQ Sbjct: 686 MDFNSPFEEKGLLDATMKAMKFSVGCCSEESQNVIILKSYSILSSRTNFQ 735 >emb|CBI36057.3| unnamed protein product [Vitis vinifera] Length = 1146 Score = 123 bits (308), Expect = 2e-26 Identities = 65/109 (59%), Positives = 80/109 (73%) Frame = +2 Query: 2 AVFVNLSEVYVHRNLRSSEIAVQLLECYSCKLLPWIHENGGSEEFIVQFAVEIWSQAGNC 181 A+F NLSEVYVH NL+S++IAVQLLECYS KLLP IH G E+ + +FAV IW+Q N Sbjct: 637 AIFANLSEVYVHGNLKSAKIAVQLLECYSNKLLPGIHGAGDFEDVLSRFAVNIWNQIENS 696 Query: 182 MDFSAPFEEKGLLDAIMKAMKVSVGCCSVESQNIIIQKAYSILSSHTNF 328 M FS +E LL+A M AMK++VG CS SQ II+KAYS+LSS +F Sbjct: 697 MAFSVGAQENELLNATMTAMKLAVGSCSEGSQGKIIKKAYSVLSSCPSF 745 >ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis sativus] Length = 1147 Score = 110 bits (275), Expect = 1e-22 Identities = 55/104 (52%), Positives = 73/104 (70%), Gaps = 2/104 (1%) Frame = +2 Query: 5 VFVNLSEVYVHRNLRSSEIAVQLLECYSCKLLPWIHENGGSEEFIVQFAVEIWSQAGNCM 184 +F NLSEVYV+ N +S EI + LL+CYS K+LPW E G EE I++FA+ IW Q C Sbjct: 630 IFYNLSEVYVYGNSKSVEIVLSLLDCYSTKILPWFDEAGDFEEVILRFALNIWDQIEKCS 689 Query: 185 DFSAPFEE--KGLLDAIMKAMKVSVGCCSVESQNIIIQKAYSIL 310 FS ++ + LLDA M A+K+SV CS ESQNII+QKA+++L Sbjct: 690 TFSTSMDKCIQVLLDATMMALKLSVRSCSKESQNIIVQKAFNVL 733