BLASTX nr result

ID: Glycyrrhiza24_contig00030281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030281
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788...   199   2e-49
ref|XP_003597674.1| MMS19 nucleotide excision repair protein-lik...   184   8e-45
ref|XP_003616940.1| MMS19 nucleotide excision repair protein-lik...   179   2e-43
emb|CBI36057.3| unnamed protein product [Vitis vinifera]              123   2e-26
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...   110   1e-22

>ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788537 [Glycine max]
          Length = 1135

 Score =  199 bits (506), Expect = 2e-49
 Identities = 93/110 (84%), Positives = 105/110 (95%)
 Frame = +2

Query: 2   AVFVNLSEVYVHRNLRSSEIAVQLLECYSCKLLPWIHENGGSEEFIVQFAVEIWSQAGNC 181
           AVF NLS+VYVHRNLRSSEIAVQLLECYSC+LLPWIHENGGSE+F++QFAV+IWSQAGNC
Sbjct: 631 AVFANLSKVYVHRNLRSSEIAVQLLECYSCQLLPWIHENGGSEDFVMQFAVDIWSQAGNC 690

Query: 182 MDFSAPFEEKGLLDAIMKAMKVSVGCCSVESQNIIIQKAYSILSSHTNFQ 331
           MD S PFE KGLLDA+MKAM++SVG CSVESQN+II+KAYS+LSSHTNFQ
Sbjct: 691 MDLSTPFEGKGLLDAMMKAMRLSVGSCSVESQNLIIRKAYSVLSSHTNFQ 740


>ref|XP_003597674.1| MMS19 nucleotide excision repair protein-like protein [Medicago
           truncatula] gi|355486722|gb|AES67925.1| MMS19 nucleotide
           excision repair protein-like protein [Medicago
           truncatula]
          Length = 1140

 Score =  184 bits (466), Expect = 8e-45
 Identities = 88/110 (80%), Positives = 99/110 (90%)
 Frame = +2

Query: 2   AVFVNLSEVYVHRNLRSSEIAVQLLECYSCKLLPWIHENGGSEEFIVQFAVEIWSQAGNC 181
           A+F NLSEV  H NL S E AVQLLECYSCKLLPWI +NGG+EEF+VQFAV+IW+QAGNC
Sbjct: 628 AIFTNLSEV--HSNLTSHETAVQLLECYSCKLLPWILKNGGAEEFVVQFAVDIWNQAGNC 685

Query: 182 MDFSAPFEEKGLLDAIMKAMKVSVGCCSVESQNIIIQKAYSILSSHTNFQ 331
           MDF++PFE+KGLLDA+MKAMKVSVGCCSVESQN+ IQKAYS LSSHT FQ
Sbjct: 686 MDFNSPFEDKGLLDAMMKAMKVSVGCCSVESQNVTIQKAYSTLSSHTKFQ 735


>ref|XP_003616940.1| MMS19 nucleotide excision repair protein-like protein [Medicago
           truncatula] gi|355518275|gb|AES99898.1| MMS19 nucleotide
           excision repair protein-like protein [Medicago
           truncatula]
          Length = 1139

 Score =  179 bits (455), Expect = 2e-43
 Identities = 87/110 (79%), Positives = 98/110 (89%)
 Frame = +2

Query: 2   AVFVNLSEVYVHRNLRSSEIAVQLLECYSCKLLPWIHENGGSEEFIVQFAVEIWSQAGNC 181
           A+F NLSEV  HRNL S + AVQLLECYSCKLLPWI ENGG+EEFI+QF+V+IW+QAGNC
Sbjct: 628 AIFANLSEV--HRNLTSYDTAVQLLECYSCKLLPWILENGGAEEFILQFSVDIWNQAGNC 685

Query: 182 MDFSAPFEEKGLLDAIMKAMKVSVGCCSVESQNIIIQKAYSILSSHTNFQ 331
           MDF++PFEEKGLLDA MKAMK SVGCCS ESQN+II K+YSILSS TNFQ
Sbjct: 686 MDFNSPFEEKGLLDATMKAMKFSVGCCSEESQNVIILKSYSILSSRTNFQ 735


>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  123 bits (308), Expect = 2e-26
 Identities = 65/109 (59%), Positives = 80/109 (73%)
 Frame = +2

Query: 2   AVFVNLSEVYVHRNLRSSEIAVQLLECYSCKLLPWIHENGGSEEFIVQFAVEIWSQAGNC 181
           A+F NLSEVYVH NL+S++IAVQLLECYS KLLP IH  G  E+ + +FAV IW+Q  N 
Sbjct: 637 AIFANLSEVYVHGNLKSAKIAVQLLECYSNKLLPGIHGAGDFEDVLSRFAVNIWNQIENS 696

Query: 182 MDFSAPFEEKGLLDAIMKAMKVSVGCCSVESQNIIIQKAYSILSSHTNF 328
           M FS   +E  LL+A M AMK++VG CS  SQ  II+KAYS+LSS  +F
Sbjct: 697 MAFSVGAQENELLNATMTAMKLAVGSCSEGSQGKIIKKAYSVLSSCPSF 745


>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog
           [Cucumis sativus]
          Length = 1147

 Score =  110 bits (275), Expect = 1e-22
 Identities = 55/104 (52%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
 Frame = +2

Query: 5   VFVNLSEVYVHRNLRSSEIAVQLLECYSCKLLPWIHENGGSEEFIVQFAVEIWSQAGNCM 184
           +F NLSEVYV+ N +S EI + LL+CYS K+LPW  E G  EE I++FA+ IW Q   C 
Sbjct: 630 IFYNLSEVYVYGNSKSVEIVLSLLDCYSTKILPWFDEAGDFEEVILRFALNIWDQIEKCS 689

Query: 185 DFSAPFEE--KGLLDAIMKAMKVSVGCCSVESQNIIIQKAYSIL 310
            FS   ++  + LLDA M A+K+SV  CS ESQNII+QKA+++L
Sbjct: 690 TFSTSMDKCIQVLLDATMMALKLSVRSCSKESQNIIVQKAFNVL 733


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