BLASTX nr result

ID: Glycyrrhiza24_contig00030280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030280
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628563.1| Multidrug resistance protein ABC transporter...   209   1e-52
ref|XP_003547376.1| PREDICTED: ABC transporter C family member 4...   206   1e-51
ref|XP_003533361.1| PREDICTED: ABC transporter C family member 4...   202   2e-50
ref|XP_003630933.1| Tau class glutathione S-transferase [Medicag...   201   5e-50
ref|XP_002321011.1| multidrug resistance protein ABC transporter...   131   5e-29

>ref|XP_003628563.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula] gi|355522585|gb|AET03039.1| Multidrug
           resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 1498

 Score =  209 bits (533), Expect = 1e-52
 Identities = 107/136 (78%), Positives = 115/136 (84%)
 Frame = +3

Query: 3   SKHPLSLRIYWIANFVLACFFAASAIVRFVTVGEEWFELSLRIDDIFSLVNLSLSVFFFV 182
           SKHPLSLRIYWIANFV+A  FA SA+ R V   EE  ELSLRIDDIFSLVNL LS+FFFV
Sbjct: 155 SKHPLSLRIYWIANFVIASLFAISAVFRIVNASEEKLELSLRIDDIFSLVNLPLSLFFFV 214

Query: 183 IAIKGSSGIHVIRISDVVTTTYQLLSTDRTLSPYARASIISKTVWLWMNPLINKGYKTPL 362
           I+I+GSSGIHVIRISDVV  TY  + TD  LSPYA +S +SKTVW WMNPLINKGYKTPL
Sbjct: 215 ISIRGSSGIHVIRISDVV-ATYTSVPTDGNLSPYAGSSFLSKTVWFWMNPLINKGYKTPL 273

Query: 363 KLEDVPSLPLEFRAEK 410
           KLEDVPSLPLEFRAEK
Sbjct: 274 KLEDVPSLPLEFRAEK 289


>ref|XP_003547376.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1501

 Score =  206 bits (525), Expect = 1e-51
 Identities = 104/136 (76%), Positives = 116/136 (85%)
 Frame = +3

Query: 3   SKHPLSLRIYWIANFVLACFFAASAIVRFVTVGEEWFELSLRIDDIFSLVNLSLSVFFFV 182
           SKHPLSLRIYWIAN V++C FA SAIVR +TV     ELSLR+DDIFSLVNL LS F F+
Sbjct: 160 SKHPLSLRIYWIANLVVSCLFATSAIVRLITVDVVKLELSLRVDDIFSLVNLPLSAFLFL 219

Query: 183 IAIKGSSGIHVIRISDVVTTTYQLLSTDRTLSPYARASIISKTVWLWMNPLINKGYKTPL 362
           +A+KGS+GI VIRISDVV TTYQ L TDRTLSPYA +S  SKTVWLWMNPL+NKGYKT L
Sbjct: 220 VAMKGSTGIQVIRISDVV-TTYQSLYTDRTLSPYAYSSFFSKTVWLWMNPLLNKGYKTSL 278

Query: 363 KLEDVPSLPLEFRAEK 410
           KLEDVPSLP++FRAEK
Sbjct: 279 KLEDVPSLPIDFRAEK 294


>ref|XP_003533361.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1506

 Score =  202 bits (515), Expect = 2e-50
 Identities = 99/136 (72%), Positives = 116/136 (85%)
 Frame = +3

Query: 3   SKHPLSLRIYWIANFVLACFFAASAIVRFVTVGEEWFELSLRIDDIFSLVNLSLSVFFFV 182
           SKHPLSLRIYWIAN +++C FA SAIVR +T+     EL LR+DD+FSLVNL LS F F+
Sbjct: 160 SKHPLSLRIYWIANLMVSCLFATSAIVRLITIDVAKVELCLRVDDVFSLVNLPLSAFLFL 219

Query: 183 IAIKGSSGIHVIRISDVVTTTYQLLSTDRTLSPYARASIISKTVWLWMNPLINKGYKTPL 362
           +A+KGS+GI VIRISDVV TTYQ L +DRTLSPYA +S  SKTVWLWMNPL+NKGY+TPL
Sbjct: 220 VAMKGSTGIQVIRISDVV-TTYQSLYSDRTLSPYAYSSFFSKTVWLWMNPLLNKGYQTPL 278

Query: 363 KLEDVPSLPLEFRAEK 410
           KLEDVPSLP++FRAEK
Sbjct: 279 KLEDVPSLPIDFRAEK 294


>ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
            gi|355524955|gb|AET05409.1| Tau class glutathione
            S-transferase [Medicago truncatula]
          Length = 1320

 Score =  201 bits (511), Expect = 5e-50
 Identities = 103/136 (75%), Positives = 111/136 (81%)
 Frame = +3

Query: 3    SKHPLSLRIYWIANFVLACFFAASAIVRFVTVGEEWFELSLRIDDIFSLVNLSLSVFFFV 182
            SKHPLSLRIYWI NFV+A  FA SA+ R V   EE  ELSLRIDDIFSLVNL LS FFFV
Sbjct: 867  SKHPLSLRIYWIVNFVIASLFAISAVFRIVNTSEEKMELSLRIDDIFSLVNLPLSAFFFV 926

Query: 183  IAIKGSSGIHVIRISDVVTTTYQLLSTDRTLSPYARASIISKTVWLWMNPLINKGYKTPL 362
            I+I+GSSGI VIRISDVV  TY  + TD  LSPYA +S +SKTVW WMNPLIN GYKTPL
Sbjct: 927  ISIRGSSGILVIRISDVV-ATYTSVPTDGNLSPYAGSSFLSKTVWFWMNPLINNGYKTPL 985

Query: 363  KLEDVPSLPLEFRAEK 410
            KLED+PSLPLEFRAEK
Sbjct: 986  KLEDIPSLPLEFRAEK 1001


>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1507

 Score =  131 bits (330), Expect = 5e-29
 Identities = 70/138 (50%), Positives = 94/138 (68%), Gaps = 4/138 (2%)
 Frame = +3

Query: 9   HPLSLRIYWIANFVLACFFAASAIVRFVTVGEEWFELSLRIDDIFSLVNLSLSVFFFVIA 188
           HPLSLRIYW+ANF++   F +S I+R V +     E +L  DDI S +  +LS+  F +A
Sbjct: 163 HPLSLRIYWVANFIIISMFMSSGIIRLVAL-----EHNLLFDDIVSAMAFTLSIVLFSVA 217

Query: 189 IKGSSGIHVIRISDVV----TTTYQLLSTDRTLSPYARASIISKTVWLWMNPLINKGYKT 356
           IKGS+GI VIR S+ V    T  ++ L     ++ +A ASIISK+ WLWMNPL+ KGYK+
Sbjct: 218 IKGSTGITVIRHSESVMHDDTKLHEPLLGKSNVTGFATASIISKSFWLWMNPLLRKGYKS 277

Query: 357 PLKLEDVPSLPLEFRAEK 410
           PLK++DVP+L  E RAEK
Sbjct: 278 PLKIDDVPTLSPEHRAEK 295


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