BLASTX nr result
ID: Glycyrrhiza24_contig00030278
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00030278
(412 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588887.1| Pentatricopeptide repeat-containing protein ... 256 2e-66
ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containi... 252 2e-65
ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containi... 251 3e-65
ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi... 209 2e-52
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera] 209 2e-52
>ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 697
Score = 256 bits (653), Expect = 2e-66
Identities = 123/136 (90%), Positives = 130/136 (95%)
Frame = -3
Query: 410 ALEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMIT 231
ALEK +EIHNLI+ERNL NNEVVMGALLDMYAKCGAV+EAFGVFKCLPERDLVSWTSMIT
Sbjct: 424 ALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMIT 483
Query: 230 AYGSHGRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDGFYYFDQMINVYGII 51
AYGSHGR YEALELFAEMLQSNVKPDRVT+LAILSAC HAGLVDDG Y+F+QMINVYGII
Sbjct: 484 AYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGII 543
Query: 50 PRVEHYSCLIDLLGRA 3
PR+EHYSCLI LLGRA
Sbjct: 544 PRIEHYSCLITLLGRA 559
Score = 87.0 bits (214), Expect = 1e-15
Identities = 39/105 (37%), Positives = 65/105 (61%)
Frame = -3
Query: 407 LEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITA 228
L + K +H II +Q + + +L+D+Y KCG V+ A +FK +P+ VSW MI+
Sbjct: 324 LLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISG 383
Query: 227 YGSHGRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDG 93
Y + G+ ++AL LF EM +S V+PD +T+ ++L+AC ++ G
Sbjct: 384 YVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKG 428
Score = 80.5 bits (197), Expect = 1e-13
Identities = 43/131 (32%), Positives = 68/131 (51%)
Frame = -3
Query: 407 LEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITA 228
L++ +EIH ++ + + V AL+DMY KCG ++ A VF+ +P + +V+W SMI
Sbjct: 223 LDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMING 282
Query: 227 YGSHGRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDGFYYFDQMINVYGIIP 48
YG G ++LF M VKP T + L AC + + +G + +I I P
Sbjct: 283 YGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIR-NRIQP 341
Query: 47 RVEHYSCLIDL 15
+ S L+DL
Sbjct: 342 DIFLNSSLMDL 352
Score = 65.5 bits (158), Expect = 4e-09
Identities = 33/108 (30%), Positives = 57/108 (52%)
Frame = -3
Query: 389 IHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITAYGSHGR 210
IH +++ L + VV +L+ MYAKC + A +F +P++D+ W ++I+ Y G+
Sbjct: 128 IHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGK 187
Query: 209 AYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDGFYYFDQMIN 66
EAL F M + +PD VT +S+C +D G +++N
Sbjct: 188 FEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVN 235
>ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 252 bits (644), Expect = 2e-65
Identities = 123/136 (90%), Positives = 128/136 (94%)
Frame = -3
Query: 410 ALEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMIT 231
ALEK KEIHNLIIE+ L NNEVVMGALLDMYAKCGAVDEAF VFKCLP+RDLVSWTSMIT
Sbjct: 424 ALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMIT 483
Query: 230 AYGSHGRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDGFYYFDQMINVYGII 51
AYGSHG AY ALELFAEMLQSNVKPDRV +LAILSACGHAGLVD+G YYF+QMINVYGII
Sbjct: 484 AYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGII 543
Query: 50 PRVEHYSCLIDLLGRA 3
PRVEHYSCLIDLLGRA
Sbjct: 544 PRVEHYSCLIDLLGRA 559
Score = 84.3 bits (207), Expect = 9e-15
Identities = 39/105 (37%), Positives = 65/105 (61%)
Frame = -3
Query: 407 LEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITA 228
L + K +H I +Q + V +L+D+Y KCG V+ A +FK +P+ +VSW MI+
Sbjct: 324 LLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISG 383
Query: 227 YGSHGRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDG 93
Y + G+ +EAL LF+EM +S V+ D +T+ ++L+AC ++ G
Sbjct: 384 YVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKG 428
Score = 74.7 bits (182), Expect = 7e-12
Identities = 41/131 (31%), Positives = 66/131 (50%)
Frame = -3
Query: 407 LEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITA 228
L + EIH +I + + AL+DMY KCG ++ A +F+ +P++ +V+W SMI+
Sbjct: 223 LNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISG 282
Query: 227 YGSHGRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDGFYYFDQMINVYGIIP 48
YG G ++LF M VKP T +++ C + + +G + I I P
Sbjct: 283 YGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIR-NRIQP 341
Query: 47 RVEHYSCLIDL 15
V S L+DL
Sbjct: 342 DVFVNSSLMDL 352
Score = 71.6 bits (174), Expect = 6e-11
Identities = 40/130 (30%), Positives = 69/130 (53%)
Frame = -3
Query: 395 KEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITAYGSH 216
K IH +I+ L + VV +L+ MY KC A ++A +F +PE+D+ W ++I+ Y
Sbjct: 126 KMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQS 185
Query: 215 GRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDGFYYFDQMINVYGIIPRVEH 36
G +ALE F M + +P+ VT +S+C ++ G +++IN G +
Sbjct: 186 GNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELIN-SGFLLDSFI 244
Query: 35 YSCLIDLLGR 6
S L+D+ G+
Sbjct: 245 SSALVDMYGK 254
>ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 251 bits (642), Expect = 3e-65
Identities = 121/136 (88%), Positives = 130/136 (95%)
Frame = -3
Query: 410 ALEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMIT 231
ALEK +EIHNLIIE+ L NNEVVMGALLDMYAKCGAVDEAF VFKCLP+RDLVSWTSMIT
Sbjct: 424 ALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMIT 483
Query: 230 AYGSHGRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDGFYYFDQMINVYGII 51
AYGSHG+AY ALELFAEMLQSN+KPDRVT+LAILSACGHAGLVD+G YYF+QM+NVYGII
Sbjct: 484 AYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGII 543
Query: 50 PRVEHYSCLIDLLGRA 3
PRVEHYSCLIDLLGRA
Sbjct: 544 PRVEHYSCLIDLLGRA 559
Score = 89.0 bits (219), Expect = 4e-16
Identities = 39/105 (37%), Positives = 67/105 (63%)
Frame = -3
Query: 407 LEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITA 228
L + K +H I +Q++ + +L+D+Y KCG V+ A +FK +P+ +VSW MI+
Sbjct: 324 LLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISG 383
Query: 227 YGSHGRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDG 93
Y + G+ +EAL LF+EM +S V+PD +T+ ++L+AC ++ G
Sbjct: 384 YVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKG 428
Score = 74.7 bits (182), Expect = 7e-12
Identities = 34/105 (32%), Positives = 57/105 (54%)
Frame = -3
Query: 407 LEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITA 228
L + EIH +I + + AL+DMY KCG ++ A VF+ +P++ +V+W SMI+
Sbjct: 223 LNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISG 282
Query: 227 YGSHGRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDG 93
YG G + ++LF M VKP T +++ C + + +G
Sbjct: 283 YGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEG 327
Score = 73.9 bits (180), Expect = 1e-11
Identities = 41/130 (31%), Positives = 70/130 (53%)
Frame = -3
Query: 395 KEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITAYGSH 216
K IH +++ L + VV +L+ MYAKC A ++A +F +PE+D+ W ++I+ Y
Sbjct: 126 KMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQS 185
Query: 215 GRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDGFYYFDQMINVYGIIPRVEH 36
G EALE F M + +P+ VT +S+C ++ G +++IN G +
Sbjct: 186 GNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELIN-SGFLLDSFI 244
Query: 35 YSCLIDLLGR 6
S L+D+ G+
Sbjct: 245 SSALVDMYGK 254
Score = 55.8 bits (133), Expect = 3e-06
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Frame = -3
Query: 410 ALEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVS-WTSMI 234
+L++ K IH ++ LQN+ + L+++Y C D A VF + +S W ++
Sbjct: 18 SLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPCEISLWNGLM 77
Query: 233 TAYGSHGRAYEALELFAEMLQ-SNVKPDRVTYLAILSACG 117
Y + EALELF ++L +KPD TY ++L ACG
Sbjct: 78 AGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACG 117
>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 209 bits (532), Expect = 2e-52
Identities = 102/134 (76%), Positives = 113/134 (84%)
Frame = -3
Query: 407 LEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITA 228
LEK KEIHN IIE L+ NEVVMGALLDMYAKCGAVDEA +F LPERD VSWTSMI A
Sbjct: 425 LEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAA 484
Query: 227 YGSHGRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDGFYYFDQMINVYGIIP 48
YGSHG+A+EAL+LF +M QS+ KPD+VT+LAILSAC HAGLVD+G YYF+QMI YG P
Sbjct: 485 YGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKP 544
Query: 47 RVEHYSCLIDLLGR 6
VEHYSCLIDLLGR
Sbjct: 545 AVEHYSCLIDLLGR 558
Score = 81.6 bits (200), Expect = 6e-14
Identities = 38/105 (36%), Positives = 63/105 (60%)
Frame = -3
Query: 407 LEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITA 228
L+ K IH II ++ + V +L+D+Y KCG + A VF+ +P+ ++VSW MI+
Sbjct: 324 LQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISG 383
Query: 227 YGSHGRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDG 93
Y G EAL +F +M ++ VKPD +T+ ++L AC +++ G
Sbjct: 384 YVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKG 428
Score = 81.3 bits (199), Expect = 8e-14
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 15/128 (11%)
Frame = -3
Query: 395 KEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITAYGSH 216
K +H +I+ + VVM + + MYAKC ++A +F +PERD+ SW ++I+ Y
Sbjct: 126 KMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQD 185
Query: 215 GRAYEALELFAEMLQSNVKPDRVTYLAILSACG-----------HAGLVDDGF----YYF 81
G+ +ALELF EM S KPD VT ++S+C H LV GF +
Sbjct: 186 GQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS 245
Query: 80 DQMINVYG 57
++++YG
Sbjct: 246 SALVDMYG 253
Score = 74.7 bits (182), Expect = 7e-12
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Frame = -3
Query: 407 LEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITA 228
LE+ KEIH ++ + V AL+DMY KCG ++ A VF+ + +++VSW SMI
Sbjct: 223 LERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAG 282
Query: 227 YGSHGRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDGFYYFDQMINVYGIIP 48
Y G + +ELF M + ++P T +IL AC + + G + I+ Y I
Sbjct: 283 YSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLG-----KFIHGYIIRN 337
Query: 47 RVEH----YSCLIDL 15
RVE S LIDL
Sbjct: 338 RVEADIFVNSSLIDL 352
>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 209 bits (532), Expect = 2e-52
Identities = 102/134 (76%), Positives = 113/134 (84%)
Frame = -3
Query: 407 LEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITA 228
LEK KEIHN IIE L+ NEVVMGALLDMYAKCGAVDEA +F LPERD VSWTSMI A
Sbjct: 617 LEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAA 676
Query: 227 YGSHGRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDGFYYFDQMINVYGIIP 48
YGSHG+A+EAL+LF +M QS+ KPD+VT+LAILSAC HAGLVD+G YYF+QMI YG P
Sbjct: 677 YGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKP 736
Query: 47 RVEHYSCLIDLLGR 6
VEHYSCLIDLLGR
Sbjct: 737 AVEHYSCLIDLLGR 750
Score = 81.6 bits (200), Expect = 6e-14
Identities = 38/105 (36%), Positives = 63/105 (60%)
Frame = -3
Query: 407 LEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITA 228
L+ K IH II ++ + V +L+D+Y KCG + A VF+ +P+ ++VSW MI+
Sbjct: 516 LQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISG 575
Query: 227 YGSHGRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDG 93
Y G EAL +F +M ++ VKPD +T+ ++L AC +++ G
Sbjct: 576 YVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKG 620
Score = 81.3 bits (199), Expect = 8e-14
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 15/128 (11%)
Frame = -3
Query: 395 KEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITAYGSH 216
K +H +I+ + VVM + + MYAKC ++A +F +PERD+ SW ++I+ Y
Sbjct: 318 KMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQD 377
Query: 215 GRAYEALELFAEMLQSNVKPDRVTYLAILSACG-----------HAGLVDDGF----YYF 81
G+ +ALELF EM S KPD VT ++S+C H LV GF +
Sbjct: 378 GQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS 437
Query: 80 DQMINVYG 57
++++YG
Sbjct: 438 SALVDMYG 445
Score = 74.7 bits (182), Expect = 7e-12
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Frame = -3
Query: 407 LEKSKEIHNLIIERNLQNNEVVMGALLDMYAKCGAVDEAFGVFKCLPERDLVSWTSMITA 228
LE+ KEIH ++ + V AL+DMY KCG ++ A VF+ + +++VSW SMI
Sbjct: 415 LERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAG 474
Query: 227 YGSHGRAYEALELFAEMLQSNVKPDRVTYLAILSACGHAGLVDDGFYYFDQMINVYGIIP 48
Y G + +ELF M + ++P T +IL AC + + G + I+ Y I
Sbjct: 475 YSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLG-----KFIHGYIIRN 529
Query: 47 RVEH----YSCLIDL 15
RVE S LIDL
Sbjct: 530 RVEADIFVNSSLIDL 544