BLASTX nr result
ID: Glycyrrhiza24_contig00030274
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00030274
(292 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containi... 168 5e-40
ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containi... 168 5e-40
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,... 152 4e-35
ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containi... 150 8e-35
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi... 146 2e-33
>ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 511
Score = 168 bits (425), Expect = 5e-40
Identities = 78/96 (81%), Positives = 86/96 (89%)
Frame = +1
Query: 1 MNERNISARLYTFSVLVTGLCKNRRLHEARDILRLLKRSDIVPQPFVYNTVIDGYCKLGN 180
MNE+NI A LYT+SVLV+GLC N RLH+ARDILRLL SDIVPQPF+YN VIDGYCK GN
Sbjct: 344 MNEKNIGASLYTYSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGN 403
Query: 181 VDEANRIIAEMEEKRCKPDKLTYTILIIGHCMKGRM 288
VDEAN+I+AEME RCKPDKLT+TILIIGHCMKGRM
Sbjct: 404 VDEANKIVAEMEVNRCKPDKLTFTILIIGHCMKGRM 439
Score = 58.9 bits (141), Expect = 4e-07
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 31 YTFSVLVTGLCKNRRLHEARDILRLLKRSDIVPQPFVYNTVIDGYCKLGNVDEANRIIAE 210
YT ++L+ GLC+ + EA +L+ L+ +P YNT+I G C + VD A ++ E
Sbjct: 178 YTVNILIRGLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSLLRE 237
Query: 211 M-EEKRCKPDKLTYTILIIGHCMKGRM 288
+ PD ++YT++I G+C +M
Sbjct: 238 VCLNGEFAPDVVSYTMIISGYCKLRKM 264
Score = 57.4 bits (137), Expect = 1e-06
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +1
Query: 34 TFSVLVTGLCKNRRLHEARDILRLLKRSDIVPQPFVYNTVIDGYCKLGNVDEANRIIAEM 213
+++++++G CK R++ E + + S P F +N +IDG+ KLG++ A + ++M
Sbjct: 250 SYTMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALALYSKM 309
Query: 214 EEKRCKPDKLTYTILIIGH 270
+ C PD T+T LI GH
Sbjct: 310 LVQGCLPDVATFTSLINGH 328
>ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 598
Score = 168 bits (425), Expect = 5e-40
Identities = 78/96 (81%), Positives = 86/96 (89%)
Frame = +1
Query: 1 MNERNISARLYTFSVLVTGLCKNRRLHEARDILRLLKRSDIVPQPFVYNTVIDGYCKLGN 180
MN++NI A LYTFSVLV+GLC N RLH+ARDILRLL SDIVPQPF+YN VIDGYCK GN
Sbjct: 343 MNDKNIGATLYTFSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGN 402
Query: 181 VDEANRIIAEMEEKRCKPDKLTYTILIIGHCMKGRM 288
VDEAN+I+AEME RCKPDKLT+TILIIGHCMKGRM
Sbjct: 403 VDEANKIVAEMEVNRCKPDKLTFTILIIGHCMKGRM 438
Score = 58.5 bits (140), Expect = 5e-07
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +1
Query: 31 YTFSVLVTGLCKNRRLHEARDILRLLKRSDIVPQPFVYNTVIDGYCKLGNVDEANRIIAE 210
YT ++L+ GLC+ + EA +L L+ +P YNT+I G C++ VD A ++ E
Sbjct: 177 YTVNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKE 236
Query: 211 M-EEKRCKPDKLTYTILIIGHCMKGRM 288
+ PD ++YT +I G+C +M
Sbjct: 237 VCLNGEFAPDVVSYTTIISGYCKFSKM 263
>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 532
Score = 152 bits (383), Expect = 4e-35
Identities = 66/96 (68%), Positives = 82/96 (85%)
Frame = +1
Query: 1 MNERNISARLYTFSVLVTGLCKNRRLHEARDILRLLKRSDIVPQPFVYNTVIDGYCKLGN 180
M RN+S +YT+SV++ LCK+ R+HEARD+LR LK SD+ P+PF+YN VIDG+CK GN
Sbjct: 365 MKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGN 424
Query: 181 VDEANRIIAEMEEKRCKPDKLTYTILIIGHCMKGRM 288
VDEAN I+ EMEEKRC+PDK+T+TILIIGHCMKGRM
Sbjct: 425 VDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRM 460
Score = 59.3 bits (142), Expect = 3e-07
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 31 YTFSVLVTGLCKNRRLHEARDILRLLKRSDIVPQPFVYNTVIDGYCKLGNVDEANRIIAE 210
+TF++L+ GLC+ + + ++ ++ +P YNT+I G CK +D A ++ E
Sbjct: 199 WTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKE 258
Query: 211 MEEKR-CKPDKLTYTILIIGHCMKGRM 288
++ + C PD +TYT +I G G++
Sbjct: 259 VQSRNDCSPDVMTYTSIISGFRKLGKL 285
Score = 56.2 bits (134), Expect = 3e-06
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +1
Query: 34 TFSVLVTGLCKNRRLHEARDILRLLK-RSDIVPQPFVYNTVIDGYCKLGNVDEANRIIAE 210
T++ L++GLCK L A D+L+ ++ R+D P Y ++I G+ KLG ++ A+ + E
Sbjct: 235 TYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEE 294
Query: 211 MEEKRCKPDKLTYTILIIGHCMKGRM 288
M +P +T+ +LI G G M
Sbjct: 295 MIRSGIEPTVVTFNVLIDGFGKIGNM 320
Score = 55.8 bits (133), Expect = 4e-06
Identities = 29/93 (31%), Positives = 50/93 (53%)
Frame = +1
Query: 4 NERNISARLYTFSVLVTGLCKNRRLHEARDILRLLKRSDIVPQPFVYNTVIDGYCKLGNV 183
+ + S + T++ +++G K +L A + + RS I P +N +IDG+ K+GN+
Sbjct: 261 SRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNM 320
Query: 184 DEANRIIAEMEEKRCKPDKLTYTILIIGHCMKG 282
A + +M C PD +T+T LI G+C G
Sbjct: 321 VAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTG 353
>ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 544
Score = 150 bits (380), Expect = 8e-35
Identities = 72/95 (75%), Positives = 83/95 (87%)
Frame = +1
Query: 1 MNERNISARLYTFSVLVTGLCKNRRLHEARDILRLLKRSDIVPQPFVYNTVIDGYCKLGN 180
MN RNI A LYT+SVL++ LCK+ RL EAR++LR+LK+SDIVP FVYN VIDGYCK GN
Sbjct: 380 MNARNIPANLYTYSVLISALCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGN 439
Query: 181 VDEANRIIAEMEEKRCKPDKLTYTILIIGHCMKGR 285
+DEAN I+AEMEEK CKPDKLT+TILIIGHCMKGR
Sbjct: 440 IDEANAIVAEMEEK-CKPDKLTFTILIIGHCMKGR 473
Score = 62.8 bits (151), Expect = 3e-08
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 MNERNISARLYTFSVLVTGLCKNRRLHEARDILR-LLKRSDIVPQPFVYNTVIDGYCKLG 177
M S + T+++L+ GLC+ ++ ARD+L + + + P Y TVI GYC+L
Sbjct: 239 MGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRLS 298
Query: 178 NVDEANRIIAEMEEKRCKPDKLTYTILIIGHCMKGRMS 291
+DEA+ + EM KP+ T++ L+ G G M+
Sbjct: 299 KMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMA 336
Score = 55.5 bits (132), Expect = 5e-06
Identities = 29/72 (40%), Positives = 40/72 (55%)
Frame = +1
Query: 58 LCKNRRLHEARDILRLLKRSDIVPQPFVYNTVIDGYCKLGNVDEANRIIAEMEEKRCKPD 237
L K+ RL +A + R L RS F +N +I G C G+VDEA ++ +M C PD
Sbjct: 188 LIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDEAFELLGDMGSFGCSPD 247
Query: 238 KLTYTILIIGHC 273
+TY IL+ G C
Sbjct: 248 IVTYNILLHGLC 259
>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 146 bits (368), Expect = 2e-33
Identities = 69/97 (71%), Positives = 78/97 (80%)
Frame = +1
Query: 1 MNERNISARLYTFSVLVTGLCKNRRLHEARDILRLLKRSDIVPQPFVYNTVIDGYCKLGN 180
+N RN+S YTF++L LCK RLHEAR LR LK IV QPF+YN VIDG+CK GN
Sbjct: 404 LNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGN 463
Query: 181 VDEANRIIAEMEEKRCKPDKLTYTILIIGHCMKGRMS 291
VDEAN I+AEMEEKRCKPDK+TYTILIIGHCMKGR+S
Sbjct: 464 VDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLS 500
Score = 63.9 bits (154), Expect = 1e-08
Identities = 29/96 (30%), Positives = 57/96 (59%)
Frame = +1
Query: 1 MNERNISARLYTFSVLVTGLCKNRRLHEARDILRLLKRSDIVPQPFVYNTVIDGYCKLGN 180
+++ ++S + T++ +++G CK ++ +A + + S I P F +N +I+G+ K+G+
Sbjct: 299 LSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGD 358
Query: 181 VDEANRIIAEMEEKRCKPDKLTYTILIIGHCMKGRM 288
+ A + EM C PD +T+T LI GHC G++
Sbjct: 359 MVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKV 394
Score = 62.4 bits (150), Expect = 4e-08
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +1
Query: 34 TFSVLVTGLCKNRRLHEARDILRLLKRSDIVPQPFVYNTVIDGYCKLGNVDEANRIIAEM 213
+F++L+ GLC+ ++ +A ++ ++ P YNT+I+G+C++ VD + ++ E+
Sbjct: 239 SFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKEL 298
Query: 214 EEKR-CKPDKLTYTILIIGHCMKGRM 288
K PD +TYT +I G+C G+M
Sbjct: 299 LSKNDLSPDVVTYTSIISGYCKLGKM 324
Score = 61.6 bits (148), Expect = 6e-08
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +1
Query: 19 SARLYTFSVLVTGLCKNRRLHEARDILR-LLKRSDIVPQPFVYNTVIDGYCKLGNVDEAN 195
S + T++ L+ G C+ + D+L+ LL ++D+ P Y ++I GYCKLG +++A+
Sbjct: 269 SPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKAS 328
Query: 196 RIIAEMEEKRCKPDKLTYTILIIGHCMKGRM 288
+ M KP+ T+ ILI G G M
Sbjct: 329 ILFNNMISSGIKPNAFTFNILINGFGKVGDM 359