BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030265
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47
ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago t...   186   2e-45
ref|XP_002510888.1| pentatricopeptide repeat-containing protein,...   144   1e-32
ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   107   1e-21
ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21

>ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 540

 Score =  192 bits (488), Expect = 2e-47
 Identities = 96/141 (68%), Positives = 112/141 (79%)
 Frame = -2

Query: 428 KSPDLGVYNIMIRACAGMEGGVDDETQYYFRALMLYKKMLFNGIVPNCLTFPFLLKGCNR 249
           K+PDL  YNIMIRA   ME G D    ++ +ALMLYK+M    IVPNCLTFPFLLKGC +
Sbjct: 82  KNPDLRAYNIMIRAYISMESGDDT---HFCKALMLYKQMFCKDIVPNCLTFPFLLKGCTQ 138

Query: 248 MLDVATGQVIHAHVMKFGFLIDVFVGNSLITLFMNCGLLNNALKLFDEMLVRDIVTWNSM 69
            LD ATGQ IH  V+KFGFL DV+V NSLI+L+M  GLL+NA K+FDEMLV D+VTWNSM
Sbjct: 139 WLDGATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVTDVVTWNSM 198

Query: 68  VVGCLRNGVVDMALDLFRKMN 6
           V+GCLRNG +DMA+DLFRKMN
Sbjct: 199 VIGCLRNGGLDMAMDLFRKMN 219


>ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355497290|gb|AES78493.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 541

 Score =  186 bits (471), Expect = 2e-45
 Identities = 97/142 (68%), Positives = 116/142 (81%), Gaps = 1/142 (0%)
 Frame = -2

Query: 428 KSPDLGVYNIMIRACAGMEGGVDDETQYYFRALMLYKKMLFNGIVPNCLTFPFLLKGCNR 249
           K P+L VYNIMIR+   +EGG  D++   ++ALMLYK+ML  GIVPN LTFPFL+KGC+R
Sbjct: 83  KYPELRVYNIMIRSYGCIEGG--DDSNCCYKALMLYKQMLNKGIVPNNLTFPFLVKGCSR 140

Query: 248 MLDVAT-GQVIHAHVMKFGFLIDVFVGNSLITLFMNCGLLNNALKLFDEMLVRDIVTWNS 72
           +    T G+VIHAHV+KFGFL DVFVGNSLI+LFMN GL  NA K+FDEM VRD+V+WNS
Sbjct: 141 LQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNS 200

Query: 71  MVVGCLRNGVVDMALDLFRKMN 6
           MVVG LRNG V+MAL+LFRKMN
Sbjct: 201 MVVGYLRNGEVEMALNLFRKMN 222



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/99 (25%), Positives = 52/99 (52%)
 Frame = -2

Query: 299 IVPNCLTFPFLLKGCNRMLDVATGQVIHAHVMKFGFLIDVFVGNSLITLFMNCGLLNNAL 120
           + P+ +T   +L  C  +  +  G+ +HA++ K     DV +G +L+ ++  CG +  A+
Sbjct: 261 VKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAI 320

Query: 119 KLFDEMLVRDIVTWNSMVVGCLRNGVVDMALDLFRKMNR 3
           ++F++M  +D   W +M+     +G    A D F +M +
Sbjct: 321 EIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEK 359


>ref|XP_002510888.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550003|gb|EEF51490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  144 bits (362), Expect = 1e-32
 Identities = 73/140 (52%), Positives = 98/140 (70%)
 Frame = -2

Query: 428 KSPDLGVYNIMIRACAGMEGGVDDETQYYFRALMLYKKMLFNGIVPNCLTFPFLLKGCNR 249
           K P+L  YNIMIRA A  +  VD +     +AL+LYK+ML N I P+CLTFPFLLK C R
Sbjct: 62  KKPNLPFYNIMIRAYAS-KSNVDYDDARLCQALILYKQMLCNDISPDCLTFPFLLKECTR 120

Query: 248 MLDVATGQVIHAHVMKFGFLIDVFVGNSLITLFMNCGLLNNALKLFDEMLVRDIVTWNSM 69
            + +  G+ IH H +K G   D+FV NSLI+ +  C  ++N+ KLFDEM  RD+V+WNSM
Sbjct: 121 NVAIYGGRGIHGHAIKLGLYSDLFVQNSLISFYSACEFVSNSRKLFDEMSNRDVVSWNSM 180

Query: 68  VVGCLRNGVVDMALDLFRKM 9
           ++G LR+G +D +L+LFRKM
Sbjct: 181 IIGYLRSGDLDQSLNLFRKM 200



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
 Frame = -2

Query: 377 MEGGVDDETQYYFRALMLYKKM--LFNGIVPNCLTFPFLLKGCNRMLDVATGQVIHAHVM 204
           ++GG   E   +F  +   +    + N + P+ +T   +L  C  +  +  G+ +H+++ 
Sbjct: 217 VQGGRPKEALEFFHEMQCLRDDDGINNKVRPDKITIASVLSACAHLGAIDHGKWVHSYLR 276

Query: 203 KFGFLIDVFVGNSLITLFMNCGLLNNALKLFDEMLVRDIVTWNSMVVGCLRNGVVDMALD 24
           + G   D+ +G +L+ ++  CG L  A ++F EM  +D + W +M+     NG    A D
Sbjct: 277 RSGLECDMVIGTALVDMYGKCGCLQRAYEVFREMSEKDTLAWTAMISVFALNGFGKEAFD 336

Query: 23  LFRKM 9
           +F +M
Sbjct: 337 MFNEM 341


>ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  107 bits (267), Expect = 1e-21
 Identities = 60/137 (43%), Positives = 86/137 (62%)
 Frame = -2

Query: 419 DLGVYNIMIRACAGMEGGVDDETQYYFRALMLYKKMLFNGIVPNCLTFPFLLKGCNRMLD 240
           D+  +N+++   A  + G  DE      AL LY +ML+  I PN  TFP +LK C  + D
Sbjct: 162 DVFSWNVLVGGYA--KAGCFDE------ALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSD 213

Query: 239 VATGQVIHAHVMKFGFLIDVFVGNSLITLFMNCGLLNNALKLFDEMLVRDIVTWNSMVVG 60
           +A G+ IHAHV++FGF  DV VGN+LIT+++ CG ++NA  LFD+M  RD ++WN+M+ G
Sbjct: 214 IARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISG 273

Query: 59  CLRNGVVDMALDLFRKM 9
              NG     L+LF  M
Sbjct: 274 YFENGGGLEGLELFSMM 290



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/111 (32%), Positives = 62/111 (55%)
 Frame = -2

Query: 341 FRALMLYKKMLFNGIVPNCLTFPFLLKGCNRMLDVATGQVIHAHVMKFGFLIDVFVGNSL 162
           F+A+  YK M   GI+P+ +T   +L  C  +  +  G  +H   +K G +  V V NSL
Sbjct: 382 FKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSL 441

Query: 161 ITLFMNCGLLNNALKLFDEMLVRDIVTWNSMVVGCLRNGVVDMALDLFRKM 9
           I ++  C  ++NAL++F  +  +++V+W S+++G   N     AL  FR+M
Sbjct: 442 IDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM 492



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/111 (30%), Positives = 62/111 (55%)
 Frame = -2

Query: 341 FRALMLYKKMLFNGIVPNCLTFPFLLKGCNRMLDVATGQVIHAHVMKFGFLIDVFVGNSL 162
           F AL+ +++M    + PN +T   +L  C R+  +  G+ IHAH ++ G   D F+ N++
Sbjct: 483 FEALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAI 541

Query: 161 ITLFMNCGLLNNALKLFDEMLVRDIVTWNSMVVGCLRNGVVDMALDLFRKM 9
           + +++ CG    AL  F+    +D+  WN ++ G  + G   +A++LF KM
Sbjct: 542 LDMYVRCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKM 591


>ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  107 bits (267), Expect = 1e-21
 Identities = 60/137 (43%), Positives = 86/137 (62%)
 Frame = -2

Query: 419 DLGVYNIMIRACAGMEGGVDDETQYYFRALMLYKKMLFNGIVPNCLTFPFLLKGCNRMLD 240
           D+  +N+++   A  + G  DE      AL LY +ML+  I PN  TFP +LK C  + D
Sbjct: 162 DVFSWNVLVGGYA--KAGCFDE------ALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSD 213

Query: 239 VATGQVIHAHVMKFGFLIDVFVGNSLITLFMNCGLLNNALKLFDEMLVRDIVTWNSMVVG 60
           +A G+ IHAHV++FGF  DV VGN+LIT+++ CG ++NA  LFD+M  RD ++WN+M+ G
Sbjct: 214 IARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISG 273

Query: 59  CLRNGVVDMALDLFRKM 9
              NG     L+LF  M
Sbjct: 274 YFENGGGLEGLELFSMM 290



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/111 (32%), Positives = 62/111 (55%)
 Frame = -2

Query: 341 FRALMLYKKMLFNGIVPNCLTFPFLLKGCNRMLDVATGQVIHAHVMKFGFLIDVFVGNSL 162
           F+A+  YK M   GI+P+ +T   +L  C  +  +  G  +H   +K G +  V V NSL
Sbjct: 382 FKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSL 441

Query: 161 ITLFMNCGLLNNALKLFDEMLVRDIVTWNSMVVGCLRNGVVDMALDLFRKM 9
           I ++  C  ++NAL++F  +  +++V+W S+++G   N     AL  FR+M
Sbjct: 442 IDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM 492



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/111 (30%), Positives = 62/111 (55%)
 Frame = -2

Query: 341 FRALMLYKKMLFNGIVPNCLTFPFLLKGCNRMLDVATGQVIHAHVMKFGFLIDVFVGNSL 162
           F AL+ +++M    + PN +T   +L  C R+  +  G+ IHAH ++ G   D F+ N++
Sbjct: 483 FEALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAI 541

Query: 161 ITLFMNCGLLNNALKLFDEMLVRDIVTWNSMVVGCLRNGVVDMALDLFRKM 9
           + +++ CG    AL  F+    +D+  WN ++ G  + G   +A++LF KM
Sbjct: 542 LDMYVRCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKM 591