BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030256
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609573.1| Pentatricopeptide repeat-containing protein ...   157   8e-37
ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containi...   154   5e-36
ref|XP_002879637.1| pentatricopeptide repeat-containing protein ...   116   2e-24
ref|XP_002516850.1| pentatricopeptide repeat-containing protein,...   112   4e-23
ref|NP_181235.1| pentatricopeptide repeat-containing protein [Ar...   111   7e-23

>ref|XP_003609573.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510628|gb|AES91770.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 665

 Score =  157 bits (397), Expect = 8e-37
 Identities = 74/90 (82%), Positives = 80/90 (88%)
 Frame = +2

Query: 2   KVFDEMAASNEVTWCSLLFAYANSCDRFGMALELFRSMPERVEIAWNIMIAGHARCGEVE 181
           KVFDEM  SNEVTWCSLLFAYAN+C RF MA E+FRSMPE+VEIAWNI+IA HARCGEVE
Sbjct: 128 KVFDEMNYSNEVTWCSLLFAYANTC-RFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVE 186

Query: 182 ACLRLFKEMCGSLYQPDQWTLSALMNACAE 271
           ACL LFKEMC +LYQPDQWT SALM+AC E
Sbjct: 187 ACLHLFKEMCENLYQPDQWTFSALMSACTE 216


>ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
           mitochondrial-like [Glycine max]
          Length = 629

 Score =  154 bits (390), Expect = 5e-36
 Identities = 75/89 (84%), Positives = 79/89 (88%)
 Frame = +2

Query: 2   KVFDEMAASNEVTWCSLLFAYANSCDRFGMALELFRSMPERVEIAWNIMIAGHARCGEVE 181
           KVFDE + SNEVTWCSL+FAYANSC R G+ALELFRSMPERV IAWNIMI GHAR GEVE
Sbjct: 129 KVFDETSDSNEVTWCSLMFAYANSC-RLGVALELFRSMPERVVIAWNIMIVGHARRGEVE 187

Query: 182 ACLRLFKEMCGSLYQPDQWTLSALMNACA 268
           ACL LFKEMCGSL QPDQWT SAL+NACA
Sbjct: 188 ACLHLFKEMCGSLCQPDQWTFSALINACA 216


>ref|XP_002879637.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325476|gb|EFH55896.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 624

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/92 (60%), Positives = 74/92 (80%), Gaps = 2/92 (2%)
 Frame = +2

Query: 2   KVFDEMA--ASNEVTWCSLLFAYANSCDRFGMALELFRSMPERVEIAWNIMIAGHARCGE 175
           KVF +M   + NEVTWCSLLFAY N+ ++F  AL++F  MP+RV  AWNIMI+GHA+CG+
Sbjct: 126 KVFRDMCCHSRNEVTWCSLLFAYMNA-EQFEAALDVFVEMPKRVPFAWNIMISGHAQCGK 184

Query: 176 VEACLRLFKEMCGSLYQPDQWTLSALMNACAE 271
           +E+CLRLFKEM  S ++PD +T S+LMNACA+
Sbjct: 185 IESCLRLFKEMLESEFEPDCFTFSSLMNACAD 216


>ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543938|gb|EEF45464.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 623

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/90 (61%), Positives = 65/90 (72%)
 Frame = +2

Query: 2   KVFDEMAASNEVTWCSLLFAYANSCDRFGMALELFRSMPERVEIAWNIMIAGHARCGEVE 181
           +VF EM   NEV+WCSLLFAY NS  RF  A E+F  MP + EIAWN MIAG  R GE+E
Sbjct: 127 QVFKEMGDINEVSWCSLLFAYTNS-GRFSEASEIFNLMPRKFEIAWNTMIAGLGRYGEIE 185

Query: 182 ACLRLFKEMCGSLYQPDQWTLSALMNACAE 271
            CL +F+EM  SL +PDQWT SAL++AC E
Sbjct: 186 LCLDMFREMRESLLEPDQWTYSALISACTE 215



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/89 (32%), Positives = 49/89 (55%)
 Frame = +2

Query: 2   KVFDEMAASNEVTWCSLLFAYANSCDRFGMALELFRSMPERVEIAWNIMIAGHARCGEVE 181
           KV +      +V+W +++ AY         A  +F+S+PE+  ++W  MI G+AR G  E
Sbjct: 259 KVVESTGRLTQVSWNAIIDAYMK-VGYVNEAYLMFQSLPEKNIVSWTSMITGYARNGYGE 317

Query: 182 ACLRLFKEMCGSLYQPDQWTLSALMNACA 268
             LR F  M  + + PD +T  A+++AC+
Sbjct: 318 EALRFFVAMASNCFLPDDFTFGAVLHACS 346


>ref|NP_181235.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206293|sp|Q9SJK9.1|PP189_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g36980, mitochondrial; Flags: Precursor
           gi|4883614|gb|AAD31583.1| hypothetical protein
           [Arabidopsis thaliana] gi|330254236|gb|AEC09330.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 625

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/91 (59%), Positives = 70/91 (76%), Gaps = 2/91 (2%)
 Frame = +2

Query: 2   KVFDEMAAS--NEVTWCSLLFAYANSCDRFGMALELFRSMPERVEIAWNIMIAGHARCGE 175
           KVF +M     NEVTWCSLLFAY N+ ++F  AL++F  MP+RV  AWNIMI+GHA CG+
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFAYMNA-EQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184

Query: 176 VEACLRLFKEMCGSLYQPDQWTLSALMNACA 268
           +E+CL LFKEM  S ++PD +T S+LMNAC+
Sbjct: 185 LESCLSLFKEMLESEFKPDCYTFSSLMNACS 215