BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030239
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi...   321   4e-86
ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi...   256   2e-66
ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi...   240   9e-62
ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|2...   234   6e-60
ref|XP_002511921.1| pentatricopeptide repeat-containing protein,...   226   2e-57

>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Glycine max]
          Length = 746

 Score =  321 bits (823), Expect = 4e-86
 Identities = 155/180 (86%), Positives = 171/180 (95%)
 Frame = -2

Query: 540  IDKAMQYFEEMMSSGCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDRSCYNV 361
            I++AMQ FEEM+SSGCSPDA+VYYSLISGL IAGRM+DASV+VSKLK AGF LDRSCYNV
Sbjct: 479  INRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNV 538

Query: 360  LISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKEG 181
            LISGFCKKKKLERVYE+L EMEETGVKPDT+TYNTL+SYLGKTGDFATASKVMEKMIKEG
Sbjct: 539  LISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEG 598

Query: 180  LEPSIVTYGALIHAYCLKKNIDEAMKIFGEMSSTSKVPPNTVIYNILIDALCKNDNVERA 1
            L PS+VTYGA+IHAYC KKN+DE MKIFGEM STSKVPPNTVIYNILIDALC+N++V+RA
Sbjct: 599  LRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRA 658



 Score =  108 bits (270), Expect = 5e-22
 Identities = 65/179 (36%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
 Frame = -2

Query: 540 IDKAMQYFEEMMSSGCS------PDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLD 379
           ID+A+Q F+ +   G S      PD +++ +LI GL   G+ +D   ++ ++K       
Sbjct: 332 IDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRP 391

Query: 378 RSC-YNVLISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVM 202
            +  YN LI GF K    +R +E+  +M E GV+P+ +T NTLV  L K G    A +  
Sbjct: 392 NTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFF 451

Query: 201 EKMIKEGLEPSIVTYGALIHAYCLKKNIDEAMKIFGEMSSTSKVPPNTVIYNILIDALC 25
            +M  +GL+ +  TY ALI A+C   NI+ AM+ F EM S S   P+ V+Y  LI  LC
Sbjct: 452 NEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLS-SGCSPDAVVYYSLISGLC 509



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 1/179 (0%)
 Frame = -2

Query: 537 DKAMQYFEEMMSSGCS-PDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDRSCYNV 361
           +  +   EEM     + P+ + Y  LI G   AG  D A  +  ++   G   +    N 
Sbjct: 374 EDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNT 433

Query: 360 LISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKEG 181
           L+ G CK  ++ R  E  NEM+  G+K +  TY  L+S      +   A +  E+M+  G
Sbjct: 434 LVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSG 493

Query: 180 LEPSIVTYGALIHAYCLKKNIDEAMKIFGEMSSTSKVPPNTVIYNILIDALCKNDNVER 4
             P  V Y +LI   C+   +++A  +  ++   +    +   YN+LI   CK   +ER
Sbjct: 494 CSPDAVVYYSLISGLCIAGRMNDASVVVSKL-KLAGFSLDRSCYNVLISGFCKKKKLER 551



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
 Frame = -2

Query: 498 GCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDRSCYNVLISGFCKKKKLERV 319
           G  PD      L+  L    +   A  ++  + R G  +D +  N L++   + + ++R+
Sbjct: 241 GVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRM 300

Query: 318 YEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKE------GLEPSIVTY 157
            E+L EME+  ++P  VT+  LV++L K      A +V +++  +      G+EP +V +
Sbjct: 301 NELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLF 360

Query: 156 GALIHAYCLKKNIDEAMKIFGEMSSTSKVPPNTVIYNILIDALCKNDNVERA 1
             LI   C     ++ + +  EM   +   PNTV YN LID   K  N +RA
Sbjct: 361 NTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRA 412



 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 42/137 (30%), Positives = 74/137 (54%), Gaps = 5/137 (3%)
 Frame = -2

Query: 417 IVSKLKRAGFGLDRSCYNVLISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLG 238
           +V+KL   G   D      L+   C  +K    +E+L+ +   G   D  + N L+++LG
Sbjct: 233 LVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLG 292

Query: 237 KTGDFATASKVMEKMIKEGLEPSIVTYGALIHAYCLKKNIDEAMKIFGEM-----SSTSK 73
           +  D    ++++ +M K  + PS+VT+G L++  C  + IDEA+++F  +     S+   
Sbjct: 293 RGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVG 352

Query: 72  VPPNTVIYNILIDALCK 22
           V P+ V++N LID LCK
Sbjct: 353 VEPDVVLFNTLIDGLCK 369



 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 44/197 (22%), Positives = 78/197 (39%), Gaps = 36/197 (18%)
 Frame = -2

Query: 540  IDKAMQYFEEMMSSGCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGF--------- 388
            +++  +   EM  +G  PD I Y +LIS L   G    AS ++ K+ + G          
Sbjct: 549  LERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGA 608

Query: 387  ---------GLDRSC------------------YNVLISGFCKKKKLERVYEMLNEMEET 289
                      +D                     YN+LI   C+   ++R   ++ +M+  
Sbjct: 609  IIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVK 668

Query: 288  GVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKEGLEPSIVTYGALIHAYCLKKNIDEA 109
             V+P+T TYN ++  +        A ++M++M++E   P  +T   L         I E 
Sbjct: 669  RVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEI-EK 727

Query: 108  MKIFGEMSSTSKVPPNT 58
            +K F E    S  P ++
Sbjct: 728  LKHFVEGYQDSSYPASS 744


>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial [Vitis vinifera]
            gi|297745328|emb|CBI40408.3| unnamed protein product
            [Vitis vinifera]
          Length = 765

 Score =  256 bits (654), Expect = 2e-66
 Identities = 120/180 (66%), Positives = 152/180 (84%)
 Frame = -2

Query: 540  IDKAMQYFEEMMSSGCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDRSCYNV 361
            I+KAM+ F+EM+ +GCSPDAIVYY+LISGLS AG++D AS ++SK+K AGF  D   +NV
Sbjct: 502  IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNV 561

Query: 360  LISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKEG 181
            LI+GFC+K KL+  YEML EME  G+KPD VTYNTL+S+  KTGDF+TA ++M+KM+KEG
Sbjct: 562  LINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621

Query: 180  LEPSIVTYGALIHAYCLKKNIDEAMKIFGEMSSTSKVPPNTVIYNILIDALCKNDNVERA 1
            L P++VTYGALIHAYCL  N+DEAMKIF +MSSTSKVPPNTVIYNILI++LC+ + V+ A
Sbjct: 622  LVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLA 681



 Score =  109 bits (272), Expect = 3e-22
 Identities = 57/180 (31%), Positives = 93/180 (51%)
 Frame = -2

Query: 540 IDKAMQYFEEMMSSGCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDRSCYNV 361
           I+ A + F++M   G  P+ +   +L+ G+   GR++ A    ++++  G   +   Y  
Sbjct: 432 IEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491

Query: 360 LISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKEG 181
           LI  FC    +E+  E+ +EM E G  PD + Y TL+S L + G    AS V+ KM + G
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG 551

Query: 180 LEPSIVTYGALIHAYCLKKNIDEAMKIFGEMSSTSKVPPNTVIYNILIDALCKNDNVERA 1
             P IV++  LI+ +C K  +DEA ++  EM +   + P+ V YN LI    K  +   A
Sbjct: 552 FSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAG-IKPDGVTYNTLISHFSKTGDFSTA 610



 Score =  108 bits (269), Expect = 7e-22
 Identities = 65/186 (34%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
 Frame = -2

Query: 540 IDKAMQYFEEMM---SSG--CSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDR 376
           +D+A++ FE+M    S+G    PD I Y +LI GL   GR ++   +V +++     +  
Sbjct: 356 VDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPN 415

Query: 375 SC-YNVLISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVME 199
           +  YN LI G+CK   +E   E+ ++M + GV P+ VT NTLV  + K G    A +   
Sbjct: 416 TVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFN 475

Query: 198 KMIKEGLEPSIVTYGALIHAYCLKKNIDEAMKIFGEMSSTSKVPPNTVIYNILIDALCKN 19
           +M  +GL+ + VTY ALI A+C   NI++AM++F EM       P+ ++Y  LI  L + 
Sbjct: 476 EMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAG-CSPDAIVYYTLISGLSQA 534

Query: 18  DNVERA 1
             ++RA
Sbjct: 535 GKLDRA 540



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 48/185 (25%), Positives = 97/185 (52%), Gaps = 12/185 (6%)
 Frame = -2

Query: 540 IDKAMQYFEEMMSSGCS--PDAIVYYSLISGLS----IAGRMDDASVI--VSKLKRAGFG 385
           +D A+   +EM+       P++   + + S LS    +   +D+  ++  VSK       
Sbjct: 208 VDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVF 267

Query: 384 LDRSCYNVLISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKV 205
            +      LIS  C+  + +R +++L+ + + G   +  + N L++ LG+  +F   + +
Sbjct: 268 PNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTL 327

Query: 204 MEKMIKEGLEPSIVTYGALIHAYCLKKNIDEAMKIFGEM----SSTSKVPPNTVIYNILI 37
           + +M +  ++P++VT+G LI+  C  + +DEA+++F +M    S+   V P+ + YN LI
Sbjct: 328 LAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLI 387

Query: 36  DALCK 22
           D LCK
Sbjct: 388 DGLCK 392



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 36/163 (22%)
 Frame = -2

Query: 540  IDKAMQYFEEMMSSGCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGF--------- 388
            +D+A +  +EM ++G  PD + Y +LIS  S  G    A  ++ K+ + G          
Sbjct: 572  LDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGA 631

Query: 387  ---------GLDRSC------------------YNVLISGFCKKKKLERVYEMLNEMEET 289
                      LD +                   YN+LI+  C+K +++    ++++M+  
Sbjct: 632  LIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVK 691

Query: 288  GVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKEGLEPSIVT 160
            GVKP+T T+N +   L +    + A ++M++M +    P  +T
Sbjct: 692  GVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYIT 734


>ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
           gi|449475521|ref|XP_004154479.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  240 bits (613), Expect = 9e-62
 Identities = 121/182 (66%), Positives = 143/182 (78%), Gaps = 2/182 (1%)
 Frame = -2

Query: 540 IDKAMQYFEEMMSSGCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDRSCYNV 361
           ++KAM++ +EM   GC PDA+VYY+LI GL+ AGR+DDAS +VSKLK AGF LDR CYNV
Sbjct: 349 MNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNV 408

Query: 360 LISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVMEKMI-KE 184
           LIS FCKK KL+R  E LNEME  GVKPD+VTYNTL+SY  K G+F  A K M+KM  +E
Sbjct: 409 LISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEE 468

Query: 183 GLEPSIVTYGALIHAYCLKKNIDEAMKIFGEMSS-TSKVPPNTVIYNILIDALCKNDNVE 7
           GL P++ TYGALIHAYCL  NIDEA+KIF EM++  SKVPPNTVIYNILID+LCK   V 
Sbjct: 469 GLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVN 528

Query: 6   RA 1
            A
Sbjct: 529 FA 530



 Score =  104 bits (259), Expect = 1e-20
 Identities = 59/186 (31%), Positives = 103/186 (55%), Gaps = 6/186 (3%)
 Frame = -2

Query: 540 IDKAMQYFEEMMSSG------CSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLD 379
           ID A++ FE+M           +PD I+Y +LI GL   GR ++A  ++ K++       
Sbjct: 203 IDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPT 262

Query: 378 RSCYNVLISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVME 199
            + +N LI+G+C+  ++E  +++ NEME   ++P+ +T NTLV  + K    +TA +   
Sbjct: 263 TATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFR 322

Query: 198 KMIKEGLEPSIVTYGALIHAYCLKKNIDEAMKIFGEMSSTSKVPPNTVIYNILIDALCKN 19
            M ++GL+ + VTY   I+A+C   N+++AM+   EMS      P+ V+Y  LI  L + 
Sbjct: 323 VMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCF-PDAVVYYTLICGLAQA 381

Query: 18  DNVERA 1
             ++ A
Sbjct: 382 GRLDDA 387



 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 55/180 (30%), Positives = 85/180 (47%)
 Frame = -2

Query: 540 IDKAMQYFEEMMSSGCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDRSCYNV 361
           I+ A + F EM ++   P+ I   +L+ G+    R+  A      +++ G   +   Y V
Sbjct: 279 IEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTV 338

Query: 360 LISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKEG 181
            I+ FC    + +  E L+EM + G  PD V Y TL+  L + G    AS V+ K+ + G
Sbjct: 339 FINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAG 398

Query: 180 LEPSIVTYGALIHAYCLKKNIDEAMKIFGEMSSTSKVPPNTVIYNILIDALCKNDNVERA 1
                V Y  LI  +C K  +D A +   EM   + V P++V YN LI    K  N + A
Sbjct: 399 FCLDRVCYNVLISEFCKKNKLDRAQEWLNEM-ELAGVKPDSVTYNTLISYFSKIGNFKLA 457



 Score = 85.9 bits (211), Expect = 4e-15
 Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
 Frame = -2

Query: 540 IDKAMQYFEEMM--SSGCSPD----AIVYYSLISGLSIAGRM--DDASVIVSKLKRAGFG 385
           +D AM   +EM+   S   P+     IV+ +L+    + GR+  D+ + +VSK  +    
Sbjct: 55  VDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIF 114

Query: 384 LDRSCYNVLISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKV 205
            D      LIS  C+       + +L+ +       D    N L++ LGK  +F   + +
Sbjct: 115 PDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLL 174

Query: 204 MEKMIKEGLEPSIVTYGALIHAYCLKKNIDEAMKIFGEMSSTSK-----VPPNTVIYNIL 40
           M KM    ++P+++T+G LI+  C  + ID+A+++F +M    +     V P+T++YN L
Sbjct: 175 MRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTL 234

Query: 39  IDALCKNDNVERA 1
           ID LCK    E A
Sbjct: 235 IDGLCKVGRQEEA 247



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/179 (24%), Positives = 84/179 (46%)
 Frame = -2

Query: 537 DKAMQYFEEMMSSGCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDRSCYNVL 358
           ++A+    +M S  C+P    +  LI+G   +G ++ A  + ++++ A    +    N L
Sbjct: 245 EEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTL 304

Query: 357 ISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKEGL 178
           + G CK  ++    E    M++ G+K + VTY   ++      +   A + +++M K+G 
Sbjct: 305 VDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGC 364

Query: 177 EPSIVTYGALIHAYCLKKNIDEAMKIFGEMSSTSKVPPNTVIYNILIDALCKNDNVERA 1
            P  V Y  LI        +D+A  +  ++        + V YN+LI   CK + ++RA
Sbjct: 365 FPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAG-FCLDRVCYNVLISEFCKKNKLDRA 422



 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
 Frame = -2

Query: 540 IDKAMQYFEEMMSSGCSPDAIVYYSLISGLSIAGRMDDASVIVSKL-KRAGFGLDRSCYN 364
           +D+A ++  EM  +G  PD++ Y +LIS  S  G    A   + K+ +  G       Y 
Sbjct: 419 LDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYG 478

Query: 363 VLISGFCKKKKLERVYEMLNEMEETGVK--PDTVTYNTLVSYLGKTGDFATASKVMEKMI 190
            LI  +C    ++   ++  EM     K  P+TV YN L+  L K      A  +++ M 
Sbjct: 479 ALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMK 538

Query: 189 KEGLEPSIVTYGALIHAYCLKKNIDEAMKIFGEM 88
             G+ P+  TY ++  A   K  +D+A K+   M
Sbjct: 539 FRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRM 572



 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
 Frame = -2

Query: 498 GCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDRSC--YNVLISGFCKKKKLE 325
           G SP    Y +LI    +   +D+A  I  ++      +  +   YN+LI   CK+ ++ 
Sbjct: 469 GLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVN 528

Query: 324 RVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKEGLEPSIVT 160
               +L++M+  GV P+T TYN++   L        A K+M++M+++   P  +T
Sbjct: 529 FALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYIT 583


>ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|222861600|gb|EEE99142.1|
            predicted protein [Populus trichocarpa]
          Length = 775

 Score =  234 bits (597), Expect = 6e-60
 Identities = 111/179 (62%), Positives = 139/179 (77%)
 Frame = -2

Query: 537  DKAMQYFEEMMSSGCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDRSCYNVL 358
            +KAM+ F EM+ SGCSPDAIVYY+LISG S AGRM DAS ++++LK+ G   D  CYN L
Sbjct: 506  EKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTL 565

Query: 357  ISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKEGL 178
            I GFC+  K  RV+EML EMEE G+KPDT+TYNTL++Y  K GD   A KVM KMIK G+
Sbjct: 566  IGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGV 625

Query: 177  EPSIVTYGALIHAYCLKKNIDEAMKIFGEMSSTSKVPPNTVIYNILIDALCKNDNVERA 1
             P++ TYGA+I+AYCL  N +EAM+IF +M + SKVPPNTVIYNILI++LCKN+ V+ A
Sbjct: 626  VPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSA 684



 Score =  106 bits (265), Expect = 2e-21
 Identities = 60/177 (33%), Positives = 99/177 (55%), Gaps = 9/177 (5%)
 Frame = -2

Query: 540 IDKAMQYFEEM--------MSSGCSPDAIVYYSLISGLSIAGRMDDASVIVSKLK-RAGF 388
           +D A++  E+M        +S    PD ++Y +LI GL   GR  +   ++ +++ + G 
Sbjct: 356 VDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGC 415

Query: 387 GLDRSCYNVLISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASK 208
             D   YN LI GFCK  ++E+  E+ +EM + GV P+ VT NTLV  + +TG  ++A  
Sbjct: 416 APDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVN 475

Query: 207 VMEKMIKEGLEPSIVTYGALIHAYCLKKNIDEAMKIFGEMSSTSKVPPNTVIYNILI 37
              +  + G++   VTY ALI+A+C   N ++AM++F EM   S   P+ ++Y  LI
Sbjct: 476 FFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLK-SGCSPDAIVYYTLI 531



 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/180 (31%), Positives = 89/180 (49%)
 Frame = -2

Query: 540 IDKAMQYFEEMMSSGCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDRSCYNV 361
           I+K  + F+EM   G +P+ +   +L+ G+   GR+  A     + +R G   D   Y  
Sbjct: 435 IEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTA 494

Query: 360 LISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKEG 181
           LI+ FC     E+  E+ NEM ++G  PD + Y TL+S   + G  A AS V+ ++ K G
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG 554

Query: 180 LEPSIVTYGALIHAYCLKKNIDEAMKIFGEMSSTSKVPPNTVIYNILIDALCKNDNVERA 1
           + P  V Y  LI  +C         ++  EM     + P+T+ YN LI    KN +++ A
Sbjct: 555 IRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAG-LKPDTITYNTLIAYASKNGDLKFA 613



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 1/172 (0%)
 Frame = -2

Query: 516 EEMMSS-GCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDRSCYNVLISGFCK 340
           E M S  GC+PD I Y  LI G   AG ++    +  ++ + G   +    N L+ G C+
Sbjct: 407 ERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCR 466

Query: 339 KKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKEGLEPSIVT 160
             ++        E +  G+K D VTY  L++      +F  A ++  +M+K G  P  + 
Sbjct: 467 TGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIV 526

Query: 159 YGALIHAYCLKKNIDEAMKIFGEMSSTSKVPPNTVIYNILIDALCKNDNVER 4
           Y  LI  +     + +A  +  E+     + P+TV YN LI   C+ +   R
Sbjct: 527 YYTLISGFSQAGRMADASFVLAELKKLG-IRPDTVCYNTLIGGFCRTNKFHR 577



 Score = 85.5 bits (210), Expect = 5e-15
 Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
 Frame = -2

Query: 525 QYFEEMMSSGCSPDAIVYYSLISGLSIAGRM------DDASVIVSKLKRAGFGLDRSCYN 364
           + FE    S C P+      L S L    R       D+   +V K    G  +      
Sbjct: 215 EMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMG 274

Query: 363 VLISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKE 184
            LI+  C+ +K  R +++  EM + G   ++   N+L++ L + G+F   +++MEKM++ 
Sbjct: 275 RLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEM 334

Query: 183 GLEPSIVTYGALIHAYCLKKNIDEAMKIFGEMSS-------TSKVPPNTVIYNILIDALC 25
            ++P++VT+G LI+  C  + +D+A+++  +MS        +  V P+ VIYN LID LC
Sbjct: 335 DIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLC 394

Query: 24  K 22
           K
Sbjct: 395 K 395



 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
 Frame = -2

Query: 417 IVSKLKRAGFGLDRSCYNVLISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLG 238
           + +++ + G  L+ +  N L++G  ++    R+ E++ +M E  ++P+ VT+  L++++ 
Sbjct: 292 LFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMC 351

Query: 237 KTGDFATASKVMEKM--------IKEGLEPSIVTYGALIHAYCLKKNIDEAMKIFGEMSS 82
           K      A +V+EKM        I   +EP +V Y  LI   C      E + +   M S
Sbjct: 352 KFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRS 411

Query: 81  TSKVPPNTVIYNILIDALCKNDNVER 4
                P+T+ YN LID  CK   +E+
Sbjct: 412 QKGCAPDTITYNCLIDGFCKAGEIEK 437



 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
 Frame = -2

Query: 534  KAMQYFEEMMSSGCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDRSCYNVLI 355
            +  +  +EM  +G  PD I Y +LI+  S  G +  A  ++ K+ +AG     + Y  +I
Sbjct: 577  RVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVI 636

Query: 354  SGFCKKKKLERVYEMLNEMEETG-VKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKEGL 178
            + +C         E+  +M+    V P+TV YN L++ L K     +A  +ME M   G+
Sbjct: 637  NAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGV 696

Query: 177  EPSIVTYGALIHAYCLKKNIDEAMKIFGEMSSTSKVPPNTVIYNILIDALCKNDNVER 4
             P+  TY A+      +K++++  +    M   +   P+ +   IL + L     +ER
Sbjct: 697  TPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHA-CNPDYITMEILTEWLSAVGEIER 753



 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
 Frame = -2

Query: 537 DKAMQYFEEMMS-SGCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDRSCYNV 361
           ++AM+ F++M + S   P+ ++Y  LI+ L    ++  A  ++  +K  G   + + YN 
Sbjct: 646 NEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNA 705

Query: 360 LISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASK 208
           +  G   +K LE+V+E ++ M E    PD +T   L  +L   G+     K
Sbjct: 706 IFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKK 756


>ref|XP_002511921.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549101|gb|EEF50590.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 248

 Score =  226 bits (576), Expect = 2e-57
 Identities = 105/171 (61%), Positives = 139/171 (81%), Gaps = 1/171 (0%)
 Frame = -2

Query: 510 MMSSGCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGLDRSCYNVLISGFCKKKK 331
           M+  GC+PDA+VYY LISGLS A RMDDA+ +++KLK AGF  D  CYN+LI GFC K +
Sbjct: 1   MLRDGCTPDAMVYYKLISGLSQARRMDDAASVLTKLKEAGFCPDIVCYNILIGGFCNKNR 60

Query: 330 LERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIKEGLEPSIVTYGA 151
           L++  EMLN+MEE G++PDT+TYNTL+SY GK GD   A ++M++MIK+GL+P++VTYG+
Sbjct: 61  LDKAREMLNDMEEAGLEPDTITYNTLISYFGKIGDIKVAHRMMKQMIKDGLQPTVVTYGS 120

Query: 150 LIHAYCLKKNIDEAMKIFGEM-SSTSKVPPNTVIYNILIDALCKNDNVERA 1
           LIHAYCL  N+DEAMKIF  M ++ S+V PN VIYNILID+LC+N+++E A
Sbjct: 121 LIHAYCLNGNVDEAMKIFKAMDAAASRVAPNNVIYNILIDSLCENNDIELA 171



 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
 Frame = -2

Query: 540 IDKAMQYFEEMMSSGCSPDAIVYYSLISGLSIAGRMDDASVIVSKLKRAGFGL--DRSCY 367
           I  A +  ++M+  G  P  + Y SLI    + G +D+A  I   +  A   +  +   Y
Sbjct: 96  IKVAHRMMKQMIKDGLQPTVVTYGSLIHAYCLNGNVDEAMKIFKAMDAAASRVAPNNVIY 155

Query: 366 NVLISGFCKKKKLERVYEMLNEMEETGVKPDTVTYNTLVSYLGKTGDFATASKVMEKMIK 187
           N+LI   C+   +E    ++++M   GVKP+T TYN +   L +      A ++M++M++
Sbjct: 156 NILIDSLCENNDIELALSLMDDMRVKGVKPNTGTYNAMFKGLRERKWLNQALELMDRMME 215

Query: 186 EGLEPSIVT 160
           +   P  +T
Sbjct: 216 QPCNPDYIT 224