BLASTX nr result

ID: Glycyrrhiza24_contig00030216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030216
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t...   161   6e-38
ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   151   6e-35
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...    89   5e-16
emb|CBI25341.3| unnamed protein product [Vitis vinifera]               89   5e-16
emb|CAN69425.1| hypothetical protein VITISV_043713 [Vitis vinifera]    89   5e-16

>ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula]
            gi|355516770|gb|AES98393.1| ATP-dependent helicase,
            putative [Medicago truncatula]
          Length = 1764

 Score =  161 bits (407), Expect = 6e-38
 Identities = 86/129 (66%), Positives = 101/129 (78%), Gaps = 1/129 (0%)
 Frame = -1

Query: 386  LYNEALTFAEEHSEDFRVDPLLNIHIHHNLAEILPLAANVALILPSKRKQFS*TSAVKAT 207
            LYNE+LT  EEHSEDFR+DPLLNIHIHHNLAEI PLA N AL LPSK KQFS TSAV  T
Sbjct: 905  LYNESLTLVEEHSEDFRLDPLLNIHIHHNLAEIFPLAENFALNLPSKGKQFSGTSAVNTT 964

Query: 206  RKHLIVKVDHGPVKRHKTNGRNDINLTVASEEPSNDA-SNLSEDDLDDQEFANLSASSIK 30
            +KH IVKVD+  VKRHK +   D +LT A+ +PSN A S+ SE+ L+D+E  +LSASS+K
Sbjct: 965  KKHYIVKVDNDQVKRHKISNCGDTSLTGAASDPSNVASSSSSENGLNDRESDDLSASSVK 1024

Query: 29   ALIAECEDS 3
             L A+CEDS
Sbjct: 1025 YLKAQCEDS 1033


>ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Glycine max]
          Length = 1600

 Score =  151 bits (381), Expect = 6e-35
 Identities = 85/130 (65%), Positives = 102/130 (78%), Gaps = 1/130 (0%)
 Frame = -1

Query: 389  ILYNEALTFAEEHSEDFRVDPLLNIHIHHNLAEILPLAANVALILPSKRKQFS*TSAVKA 210
            +LY+EAL+ AEE SEDFR+DPLLNIHIHHNLAEILPL  N ALI PSK KQFS TS  K 
Sbjct: 782  LLYSEALSLAEEQSEDFRLDPLLNIHIHHNLAEILPLVPNFALISPSKGKQFSGTSKFKM 841

Query: 209  TRKHLIVKVDHGPVKRHKTNGRNDINLTVASEEPSNDASNLSEDDL-DDQEFANLSASSI 33
            T++HL VKV+H   KR K +G +D+N+TV S EPS+ A + SE+DL +DQEF +LSA  I
Sbjct: 842  TKRHLSVKVEHCHEKRQKISGCDDVNVTVLS-EPSDVAFSHSENDLNEDQEFDSLSA--I 898

Query: 32   KALIAECEDS 3
             +LIAECEDS
Sbjct: 899  NSLIAECEDS 908


>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/107 (46%), Positives = 63/107 (58%)
 Frame = -1

Query: 386  LYNEALTFAEEHSEDFRVDPLLNIHIHHNLAEILPLAANVALILPSKRKQFS*TSAVKAT 207
            LY EAL  AEEHSEDFR+DPLLN+HIHHNL EILPL +  +    SK  +F  ++  KA+
Sbjct: 853  LYKEALALAEEHSEDFRLDPLLNLHIHHNLTEILPLPSESS--HHSKGGEFPRSAEEKAS 910

Query: 206  RKHLIVKVDHGPVKRHKTNGRNDINLTVASEEPSNDASNLSEDDLDD 66
            + H + + D    KR K  G     L     E     SNLSED ++D
Sbjct: 911  KIHNVEQCDQYMAKRQKVGGEYHSGLNGEERELPCSTSNLSEDGVND 957


>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/107 (46%), Positives = 63/107 (58%)
 Frame = -1

Query: 386  LYNEALTFAEEHSEDFRVDPLLNIHIHHNLAEILPLAANVALILPSKRKQFS*TSAVKAT 207
            LY EAL  AEEHSEDFR+DPLLN+HIHHNL EILPL +  +    SK  +F  ++  KA+
Sbjct: 878  LYKEALALAEEHSEDFRLDPLLNLHIHHNLTEILPLPSESS--HHSKGGEFPRSAEEKAS 935

Query: 206  RKHLIVKVDHGPVKRHKTNGRNDINLTVASEEPSNDASNLSEDDLDD 66
            + H + + D    KR K  G     L     E     SNLSED ++D
Sbjct: 936  KIHNVEQCDQYMAKRQKVGGEYHSGLNGEERELPCSTSNLSEDGVND 982


>emb|CAN69425.1| hypothetical protein VITISV_043713 [Vitis vinifera]
          Length = 1111

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/107 (46%), Positives = 63/107 (58%)
 Frame = -1

Query: 386  LYNEALTFAEEHSEDFRVDPLLNIHIHHNLAEILPLAANVALILPSKRKQFS*TSAVKAT 207
            LY EAL  AEEHSEDFR+DPLLN+HIHHNL EILPL +  +    SK  +F  ++  KA+
Sbjct: 910  LYKEALALAEEHSEDFRLDPLLNLHIHHNLTEILPLPSESS--HHSKGGEFPRSAEEKAS 967

Query: 206  RKHLIVKVDHGPVKRHKTNGRNDINLTVASEEPSNDASNLSEDDLDD 66
            + H + + D    KR K  G     L     E     SNLSED ++D
Sbjct: 968  KIHNVEQCDQYMAKRQKVGGEYHSGLNGEERELPCSTSNLSEDGVND 1014


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