BLASTX nr result

ID: Glycyrrhiza24_contig00030214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030214
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538103.1| PREDICTED: F-box protein At2g27310-like [Gly...   159   3e-37
ref|XP_003539477.1| PREDICTED: F-box protein At2g27310-like [Gly...   146   1e-33
ref|XP_003541964.1| PREDICTED: F-box protein At2g27310-like [Gly...   143   1e-32
ref|XP_003596861.1| F-box family protein [Medicago truncatula] g...   130   1e-28
gb|AFK33432.1| unknown [Medicago truncatula]                          129   2e-28

>ref|XP_003538103.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 341

 Score =  159 bits (401), Expect = 3e-37
 Identities = 70/104 (67%), Positives = 90/104 (86%)
 Frame = +1

Query: 22  ELISAVDIYYEGKPVFSRVRRTETKQNWFLSLPLFVEVLEPNELVPTPVKFVRKDEEWLR 201
           ELISAVD+YY+GKPVFSRV RTET++NWF + PL+++ L+  EL+PT VKF RKDEEWL+
Sbjct: 118 ELISAVDMYYQGKPVFSRVIRTETQKNWFFASPLWIDALQHKELIPTTVKFARKDEEWLK 177

Query: 202 HLEESLGLSWVLIDPTRKRAANVSSMRPVSVRRHWLTRDMEAVF 333
           HLEE+L +SW+++DPTRKRAANVSS R V  +RHWLTR++E V+
Sbjct: 178 HLEENLSVSWIIVDPTRKRAANVSSRRAVLAQRHWLTREVEVVY 221


>ref|XP_003539477.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 362

 Score =  146 bits (369), Expect = 1e-33
 Identities = 69/106 (65%), Positives = 88/106 (83%), Gaps = 2/106 (1%)
 Frame = +1

Query: 22  ELISAVDIYYEGKPVFSRVRRTETKQNWFLSLPLFVEVLEPNELVPTPVKFVRKDE--EW 195
           ELISAVDIYY+GKPVFSRV RTET + WFL  PL+V++L+P E+VPTP+KF + ++  E 
Sbjct: 143 ELISAVDIYYKGKPVFSRVIRTETHKGWFLCSPLWVDLLDPTEVVPTPLKFAQTNDEIEL 202

Query: 196 LRHLEESLGLSWVLIDPTRKRAANVSSMRPVSVRRHWLTRDMEAVF 333
           L HL E+L LSW++IDPTRKRAAN+SS RPVS RRHWLT ++E ++
Sbjct: 203 LNHLVENLALSWIIIDPTRKRAANLSSRRPVSARRHWLTAELEVLY 248


>ref|XP_003541964.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 326

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/106 (62%), Positives = 90/106 (84%), Gaps = 2/106 (1%)
 Frame = +1

Query: 22  ELISAVDIYYEGKPVFSRVRRTETKQNWFLSLPLFVEVLEPNELVPTPVKFVRKDEE--W 195
           ELISAVD+YY+GKPVFSRV +TET + WFL  PL+V++L+ NE+VPTP+KF + ++E   
Sbjct: 107 ELISAVDLYYKGKPVFSRVIKTETHKGWFLCSPLWVDLLDRNEVVPTPLKFAQTNDENKL 166

Query: 196 LRHLEESLGLSWVLIDPTRKRAANVSSMRPVSVRRHWLTRDMEAVF 333
           L HL+E+L LSW++IDPTRKRAAN+SS RPV+VRRHWLT +++ ++
Sbjct: 167 LNHLDENLTLSWIIIDPTRKRAANLSSRRPVAVRRHWLTAELQVLY 212


>ref|XP_003596861.1| F-box family protein [Medicago truncatula]
           gi|355485909|gb|AES67112.1| F-box family protein
           [Medicago truncatula]
          Length = 321

 Score =  130 bits (327), Expect = 1e-28
 Identities = 59/105 (56%), Positives = 84/105 (80%), Gaps = 1/105 (0%)
 Frame = +1

Query: 22  ELISAVDIYYEGKPVFSRVRRTETKQNWFLSLPLFVEVLEPNELVPTPVKFVRKD-EEWL 198
           EL SAVD+YY+G+PVFS++ RTET + WFL  PL++E+LEPNE++ T +KF + D  EW 
Sbjct: 106 ELFSAVDLYYKGRPVFSKLLRTETHKGWFLCSPLWIEILEPNEIIETNIKFEQNDVVEW- 164

Query: 199 RHLEESLGLSWVLIDPTRKRAANVSSMRPVSVRRHWLTRDMEAVF 333
             LE++L LSW++I+PTRKR+ N+SS  PV+VRRHWLT ++E ++
Sbjct: 165 --LEQNLSLSWIIIEPTRKRSVNLSSRLPVTVRRHWLTGELEVLY 207


>gb|AFK33432.1| unknown [Medicago truncatula]
          Length = 321

 Score =  129 bits (324), Expect = 2e-28
 Identities = 58/105 (55%), Positives = 84/105 (80%), Gaps = 1/105 (0%)
 Frame = +1

Query: 22  ELISAVDIYYEGKPVFSRVRRTETKQNWFLSLPLFVEVLEPNELVPTPVKFVRKD-EEWL 198
           EL SAVD+YY+G+PVFS++ RTET + WFL  PL++E+LEPNE++ T +KF + D  EW 
Sbjct: 106 ELFSAVDLYYKGRPVFSKLLRTETHKGWFLCSPLWIEILEPNEIIETNIKFEQNDVVEW- 164

Query: 199 RHLEESLGLSWVLIDPTRKRAANVSSMRPVSVRRHWLTRDMEAVF 333
             LE++L LSW++I+PTRKR+ N+S+  PV+VRRHWLT ++E ++
Sbjct: 165 --LEQNLSLSWIIIEPTRKRSVNLSNRLPVTVRRHWLTGELEVLY 207


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