BLASTX nr result

ID: Glycyrrhiza24_contig00030205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030205
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551619.1| PREDICTED: uncharacterized protein LOC100797...    89   5e-16
ref|XP_003534630.1| PREDICTED: uncharacterized protein LOC100802...    88   8e-16
ref|XP_002309195.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002323683.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002528710.1| DNA binding protein, putative [Ricinus commu...    80   2e-13

>ref|XP_003551619.1| PREDICTED: uncharacterized protein LOC100797203 [Glycine max]
          Length = 698

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 58/127 (45%), Positives = 77/127 (60%), Gaps = 15/127 (11%)
 Frame = -1

Query: 362 GRGRPP--PLKAN-SETQASSRT--QRHSSPIVNKGRL----------SGKSHVDGDKRV 228
           GR RP    +KAN SETQAS  T  +RHSSPIV++GR+          S   H D  +  
Sbjct: 464 GRSRPGGVTMKANVSETQASPVTMPRRHSSPIVSRGRVTEPAAKTRGYSNGHHADASEPR 523

Query: 227 PLPHLPQSVSVARKLTITSDVNNNNGFGRTISKKSLDVAFRHMDTRKSPGSVGRSFSGAM 48
            + H P+ V+  + +  ++   +N GFGRTISKKSLD+A +HMD R S G++ RS S   
Sbjct: 524 KVSHAPE-VAARKSIRSSTTAPDNTGFGRTISKKSLDMAIKHMDIRNSSGNI-RSLSSTT 581

Query: 47  VFPQSIR 27
           +FPQSIR
Sbjct: 582 LFPQSIR 588


>ref|XP_003534630.1| PREDICTED: uncharacterized protein LOC100802172 [Glycine max]
          Length = 586

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 58/127 (45%), Positives = 77/127 (60%), Gaps = 15/127 (11%)
 Frame = -1

Query: 362 GRGRPP--PLKANS-ETQASSRT--QRHSSPIVNKGRL----------SGKSHVDGDKRV 228
           GR RP    +K NS ETQAS  T  +RHSSPIV++GR+          S   HVD  +  
Sbjct: 352 GRSRPGGVTMKTNSSETQASPVTMPRRHSSPIVSRGRVTEPAAKTRGYSNGHHVDAPEPR 411

Query: 227 PLPHLPQSVSVARKLTITSDVNNNNGFGRTISKKSLDVAFRHMDTRKSPGSVGRSFSGAM 48
            + H P+ V+  + +  +S   +N GFGRTISKKSLD+A +HMD R S G++ RS +   
Sbjct: 412 KVSHAPE-VAARKSVRSSSTAPDNTGFGRTISKKSLDMAIKHMDIRNSSGNI-RSLTSTT 469

Query: 47  VFPQSIR 27
           +FPQSIR
Sbjct: 470 LFPQSIR 476


>ref|XP_002309195.1| predicted protein [Populus trichocarpa] gi|222855171|gb|EEE92718.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 54/115 (46%), Positives = 68/115 (59%), Gaps = 10/115 (8%)
 Frame = -1

Query: 341 LKANSETQAS-SRTQRHSSPIVNKGRL---SGKSHVDGDKRVPLPHLPQSVS------VA 192
           +K N ET  S +  +RHSSPIV +GRL   SGK  V  +  V     P+ VS      + 
Sbjct: 343 MKGNPETMGSLNAPRRHSSPIVTRGRLTEPSGKGRVHSNGHVADTPEPRKVSHVSEVGIR 402

Query: 191 RKLTITSDVNNNNGFGRTISKKSLDVAFRHMDTRKSPGSVGRSFSGAMVFPQSIR 27
           R +  +S  +++ GFGRTISKKSLD+A RHMD R   GS  RS S   +FPQSIR
Sbjct: 403 RPVKSSSAASDSTGFGRTISKKSLDMAIRHMDIRNGTGS-ARSLSSTTLFPQSIR 456


>ref|XP_002323683.1| predicted protein [Populus trichocarpa] gi|222868313|gb|EEF05444.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 57/125 (45%), Positives = 71/125 (56%), Gaps = 13/125 (10%)
 Frame = -1

Query: 362 GRGRP---PPLKANSETQASS-RTQRHSSPIVNKGRL---SGKSHVDGDKRVPLPHLPQS 204
           GR RP     +K N ET  S    +RHSSPIV++GRL   SGK  V  +  +     P+ 
Sbjct: 364 GRSRPNVHATMKGNPETVGSVIAPRRHSSPIVSRGRLTEPSGKGRVHSNGHIADAPEPRK 423

Query: 203 VSVARKLTI------TSDVNNNNGFGRTISKKSLDVAFRHMDTRKSPGSVGRSFSGAMVF 42
           VS   +L +      +S  + + GFGRTISKKSLD+A RHMD R   GS  RS S   +F
Sbjct: 424 VSHVSELGMRKPVKSSSTASESTGFGRTISKKSLDMAIRHMDLRNGTGST-RSLSSTTLF 482

Query: 41  PQSIR 27
           PQSIR
Sbjct: 483 PQSIR 487


>ref|XP_002528710.1| DNA binding protein, putative [Ricinus communis]
           gi|223531882|gb|EEF33699.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 580

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 55/133 (41%), Positives = 73/133 (54%), Gaps = 21/133 (15%)
 Frame = -1

Query: 362 GRGRP---PPLKANSETQASSRT-QRHSSPIVNKGRLS-----GKSHVDGDKRVPLPHLP 210
           GR RP     +K + ET  ++   +RHSSPIV++GRL+     G++H +G          
Sbjct: 357 GRSRPGASTTIKGSPETTGATNVPRRHSSPIVSRGRLAEAPGKGRAHSNGHAA------- 409

Query: 209 QSVSVARKLTITSD------------VNNNNGFGRTISKKSLDVAFRHMDTRKSPGSVGR 66
             +S  RK++  SD              +NNGFGRTISKKSLD+A RHMD R   GS  R
Sbjct: 410 -DISEPRKVSHVSDPGMRKPVKSSVTTTDNNGFGRTISKKSLDMAIRHMDIRTGNGST-R 467

Query: 65  SFSGAMVFPQSIR 27
           + S   +FPQSIR
Sbjct: 468 ALSSTTLFPQSIR 480


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