BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030203
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|XP_003629790.1| Pentatricopeptide repeat-containing protein ...    90   2e-16
ref|XP_003608008.1| Pentatricopeptide repeat-containing protein ...    90   2e-16
ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containi...    86   3e-15
ref|XP_002522236.1| pentatricopeptide repeat-containing protein,...    72   6e-12

>ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 1227

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 38/50 (76%), Positives = 47/50 (94%)
 Frame = +1

Query: 199 FVWNLMMSEYAKIGNYRESVFLFEKMQKLGIAGDSYTLTCVLKCFAALGK 348
           F+WNLMMSEYAKIG+YRES++LF+KMQKLGI G+SYT +C+LKCFA LG+
Sbjct: 519 FLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGR 568


>ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523812|gb|AET04266.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 908

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 40/50 (80%), Positives = 46/50 (92%)
 Frame = +1

Query: 199 FVWNLMMSEYAKIGNYRESVFLFEKMQKLGIAGDSYTLTCVLKCFAALGK 348
           F+WNL+MSEYAKIGN+RESV LF+KMQKLG+ G+ YT TCVLKCFAALGK
Sbjct: 161 FLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGK 210



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/51 (64%), Positives = 39/51 (76%)
 Frame = +2

Query: 14  SLTCVSASLSETTHNVTVDGNAKICKFREMGDLRNAMELLTRSQRSELELN 166
           S  CVS S + TTH+VT + NAKI KF EMGDLRNA+ELLT+S+  EL LN
Sbjct: 45  STVCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLN 95


>ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355509063|gb|AES90205.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 40/50 (80%), Positives = 46/50 (92%)
 Frame = +1

Query: 199 FVWNLMMSEYAKIGNYRESVFLFEKMQKLGIAGDSYTLTCVLKCFAALGK 348
           F+WNL+MSEYAKIGN+RESV LF+KMQKLG+ G+ YT TCVLKCFAALGK
Sbjct: 436 FLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGK 485



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/51 (64%), Positives = 39/51 (76%)
 Frame = +2

Query: 14  SLTCVSASLSETTHNVTVDGNAKICKFREMGDLRNAMELLTRSQRSELELN 166
           S  CVS S + TTH+VT + NAKI KF EMGDLRNA+ELLT+S+  EL LN
Sbjct: 320 STVCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLN 370


>ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/50 (82%), Positives = 44/50 (88%)
 Frame = +1

Query: 199 FVWNLMMSEYAKIGNYRESVFLFEKMQKLGIAGDSYTLTCVLKCFAALGK 348
           F+WNL+MSEYAKIGNYRESV LFEKMQ+LGI GDSYT TCVLK FAA  K
Sbjct: 124 FLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAK 173



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/48 (87%), Positives = 45/48 (93%), Gaps = 1/48 (2%)
 Frame = +2

Query: 26  VSASLSETTHN-VTVDGNAKICKFREMGDLRNAMELLTRSQRSELELN 166
           VSA+LSETTHN VTVD NAKICKF EMGDLRNAM+LL+RSQRSELELN
Sbjct: 11  VSATLSETTHNNVTVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELN 58


>ref|XP_002522236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538489|gb|EEF40094.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 640

 Score = 72.0 bits (175), Expect(2) = 6e-12
 Identities = 32/49 (65%), Positives = 41/49 (83%)
 Frame = +1

Query: 199 FVWNLMMSEYAKIGNYRESVFLFEKMQKLGIAGDSYTLTCVLKCFAALG 345
           F+WNLM+S YAKIG + ESV+LF KM  LGI  +S+T++C+LKCFAALG
Sbjct: 166 FLWNLMLSGYAKIGAFEESVYLFRKMLDLGIQVNSHTVSCILKCFAALG 214



 Score = 23.1 bits (48), Expect(2) = 6e-12
 Identities = 24/98 (24%), Positives = 33/98 (33%), Gaps = 54/98 (55%)
 Frame = +2

Query: 68  DGNAKICKFREMGDLRNAMELLTRSQRSEL-------------ELN-------------- 166
           D N KIC+  E+G L+NA+ELL    +S +             ELN              
Sbjct: 68  DFNRKICELCEVGSLKNAIELLDMYPKSNIDSNTYCSILQLCAELNSLQEGKKVHSFISS 127

Query: 167 ---------------------------IIFDEILNDKV 199
                                      +IFD+I N+KV
Sbjct: 128 SGIFVDGLLGTKLVFMYVNCGDIREGRVIFDKIANEKV 165