BLASTX nr result
ID: Glycyrrhiza24_contig00030196
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00030196 (269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h... 144 6e-33 ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helica... 124 6e-27 ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helica... 124 1e-26 ref|XP_002523131.1| ATP-dependent RNA helicase, putative [Ricinu... 70 1e-10 emb|CBI36896.3| unnamed protein product [Vitis vinifera] 70 2e-10 >ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago truncatula] gi|355506130|gb|AES87272.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago truncatula] Length = 1331 Score = 144 bits (364), Expect = 6e-33 Identities = 71/89 (79%), Positives = 77/89 (86%) Frame = +2 Query: 2 DKGKQLLLEKAIKTLNENTLPEYAYPLLQSSCNINRDETVKEKRRRAVHLLKEGLEVPHG 181 DK KQLLLEKA+KTLNENTLPEYA+PLLQSSCNINR ETVKEKRR+AVHLLKEGL+VPH Sbjct: 62 DKEKQLLLEKALKTLNENTLPEYAFPLLQSSCNINRVETVKEKRRKAVHLLKEGLDVPHD 121 Query: 182 DQLSKKQDYPCRTEPETEEIHLAQVQELE 268 D LSKKQD C +E E EEIH QV+E E Sbjct: 122 DDLSKKQDIACTSESEEEEIHTVQVKEFE 150 >ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Glycine max] Length = 1403 Score = 124 bits (312), Expect = 6e-27 Identities = 68/89 (76%), Positives = 72/89 (80%) Frame = +2 Query: 2 DKGKQLLLEKAIKTLNENTLPEYAYPLLQSSCNINRDETVKEKRRRAVHLLKEGLEVPHG 181 DK KQLLLEKAIKTLNENTLPEYAYPLL SSCNINRDET+KEKRRRAVHLLKEGLEV + Sbjct: 150 DKEKQLLLEKAIKTLNENTLPEYAYPLLLSSCNINRDETMKEKRRRAVHLLKEGLEVSY- 208 Query: 182 DQLSKKQDYPCRTEPETEEIHLAQVQELE 268 D LSKK PET+EIHL E+E Sbjct: 209 DGLSKK--------PETDEIHLEHADEVE 229 >ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helicase DHR1-like [Glycine max] Length = 1380 Score = 124 bits (310), Expect = 1e-26 Identities = 68/88 (77%), Positives = 72/88 (81%) Frame = +2 Query: 2 DKGKQLLLEKAIKTLNENTLPEYAYPLLQSSCNINRDETVKEKRRRAVHLLKEGLEVPHG 181 DK KQLLLEKAIKTLNENTLPEYAYPLL SSCNINRDET+KEKRRRAVHLLKEGLEV + Sbjct: 126 DKEKQLLLEKAIKTLNENTLPEYAYPLLLSSCNINRDETMKEKRRRAVHLLKEGLEVSY- 184 Query: 182 DQLSKKQDYPCRTEPETEEIHLAQVQEL 265 D LS K PET+EIHL QV E+ Sbjct: 185 DGLSMK--------PETDEIHLEQVDEV 204 >ref|XP_002523131.1| ATP-dependent RNA helicase, putative [Ricinus communis] gi|223537693|gb|EEF39316.1| ATP-dependent RNA helicase, putative [Ricinus communis] Length = 279 Score = 70.5 bits (171), Expect = 1e-10 Identities = 41/87 (47%), Positives = 55/87 (63%) Frame = +2 Query: 2 DKGKQLLLEKAIKTLNENTLPEYAYPLLQSSCNINRDETVKEKRRRAVHLLKEGLEVPHG 181 +K K+ LL K+I+TL + +PE A+ LL+SS NI+R ETVKEKR AV K GL V HG Sbjct: 30 EKEKEFLLAKSIETLEKYKIPEDAFSLLRSSKNISRVETVKEKRIMAVQFSKAGLGVSHG 89 Query: 182 DQLSKKQDYPCRTEPETEEIHLAQVQE 262 D S++ TE E+E+ H Q + Sbjct: 90 DGTSRE------TEAESEKTHSQQAMD 110 >emb|CBI36896.3| unnamed protein product [Vitis vinifera] Length = 1098 Score = 69.7 bits (169), Expect = 2e-10 Identities = 40/84 (47%), Positives = 53/84 (63%) Frame = +2 Query: 2 DKGKQLLLEKAIKTLNENTLPEYAYPLLQSSCNINRDETVKEKRRRAVHLLKEGLEVPHG 181 +K K LLL K+I+TL + + E A+ LLQSS N+ + ET EKRRRAV K GLE+PH Sbjct: 69 EKEKSLLLSKSIETLEKYKIREDAFSLLQSSQNLGQVETTLEKRRRAVRFSKAGLEMPHS 128 Query: 182 DQLSKKQDYPCRTEPETEEIHLAQ 253 D+ K QD EP++ +I Q Sbjct: 129 DRPFKSQD--GEMEPDSNKIQSKQ 150