BLASTX nr result

ID: Glycyrrhiza24_contig00030196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030196
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h...   144   6e-33
ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helica...   124   6e-27
ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helica...   124   1e-26
ref|XP_002523131.1| ATP-dependent RNA helicase, putative [Ricinu...    70   1e-10
emb|CBI36896.3| unnamed protein product [Vitis vinifera]               70   2e-10

>ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
           truncatula] gi|355506130|gb|AES87272.1|
           Pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 [Medicago truncatula]
          Length = 1331

 Score =  144 bits (364), Expect = 6e-33
 Identities = 71/89 (79%), Positives = 77/89 (86%)
 Frame = +2

Query: 2   DKGKQLLLEKAIKTLNENTLPEYAYPLLQSSCNINRDETVKEKRRRAVHLLKEGLEVPHG 181
           DK KQLLLEKA+KTLNENTLPEYA+PLLQSSCNINR ETVKEKRR+AVHLLKEGL+VPH 
Sbjct: 62  DKEKQLLLEKALKTLNENTLPEYAFPLLQSSCNINRVETVKEKRRKAVHLLKEGLDVPHD 121

Query: 182 DQLSKKQDYPCRTEPETEEIHLAQVQELE 268
           D LSKKQD  C +E E EEIH  QV+E E
Sbjct: 122 DDLSKKQDIACTSESEEEEIHTVQVKEFE 150


>ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Glycine
           max]
          Length = 1403

 Score =  124 bits (312), Expect = 6e-27
 Identities = 68/89 (76%), Positives = 72/89 (80%)
 Frame = +2

Query: 2   DKGKQLLLEKAIKTLNENTLPEYAYPLLQSSCNINRDETVKEKRRRAVHLLKEGLEVPHG 181
           DK KQLLLEKAIKTLNENTLPEYAYPLL SSCNINRDET+KEKRRRAVHLLKEGLEV + 
Sbjct: 150 DKEKQLLLEKAIKTLNENTLPEYAYPLLLSSCNINRDETMKEKRRRAVHLLKEGLEVSY- 208

Query: 182 DQLSKKQDYPCRTEPETEEIHLAQVQELE 268
           D LSKK        PET+EIHL    E+E
Sbjct: 209 DGLSKK--------PETDEIHLEHADEVE 229


>ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helicase DHR1-like [Glycine
           max]
          Length = 1380

 Score =  124 bits (310), Expect = 1e-26
 Identities = 68/88 (77%), Positives = 72/88 (81%)
 Frame = +2

Query: 2   DKGKQLLLEKAIKTLNENTLPEYAYPLLQSSCNINRDETVKEKRRRAVHLLKEGLEVPHG 181
           DK KQLLLEKAIKTLNENTLPEYAYPLL SSCNINRDET+KEKRRRAVHLLKEGLEV + 
Sbjct: 126 DKEKQLLLEKAIKTLNENTLPEYAYPLLLSSCNINRDETMKEKRRRAVHLLKEGLEVSY- 184

Query: 182 DQLSKKQDYPCRTEPETEEIHLAQVQEL 265
           D LS K        PET+EIHL QV E+
Sbjct: 185 DGLSMK--------PETDEIHLEQVDEV 204


>ref|XP_002523131.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223537693|gb|EEF39316.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 279

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 41/87 (47%), Positives = 55/87 (63%)
 Frame = +2

Query: 2   DKGKQLLLEKAIKTLNENTLPEYAYPLLQSSCNINRDETVKEKRRRAVHLLKEGLEVPHG 181
           +K K+ LL K+I+TL +  +PE A+ LL+SS NI+R ETVKEKR  AV   K GL V HG
Sbjct: 30  EKEKEFLLAKSIETLEKYKIPEDAFSLLRSSKNISRVETVKEKRIMAVQFSKAGLGVSHG 89

Query: 182 DQLSKKQDYPCRTEPETEEIHLAQVQE 262
           D  S++      TE E+E+ H  Q  +
Sbjct: 90  DGTSRE------TEAESEKTHSQQAMD 110


>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/84 (47%), Positives = 53/84 (63%)
 Frame = +2

Query: 2   DKGKQLLLEKAIKTLNENTLPEYAYPLLQSSCNINRDETVKEKRRRAVHLLKEGLEVPHG 181
           +K K LLL K+I+TL +  + E A+ LLQSS N+ + ET  EKRRRAV   K GLE+PH 
Sbjct: 69  EKEKSLLLSKSIETLEKYKIREDAFSLLQSSQNLGQVETTLEKRRRAVRFSKAGLEMPHS 128

Query: 182 DQLSKKQDYPCRTEPETEEIHLAQ 253
           D+  K QD     EP++ +I   Q
Sbjct: 129 DRPFKSQD--GEMEPDSNKIQSKQ 150


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