BLASTX nr result
ID: Glycyrrhiza24_contig00030192
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00030192 (425 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding... 218 4e-55 ref|XP_002326828.1| chromatin remodeling complex subunit [Populu... 164 5e-39 ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223... 153 2e-35 ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding... 151 5e-35 emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera] 151 5e-35 >ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Glycine max] Length = 1482 Score = 218 bits (555), Expect = 4e-55 Identities = 109/141 (77%), Positives = 122/141 (86%) Frame = +3 Query: 3 HVLCINLVTEHTVEEVIMRRAERKLQLSLNVTGDNILEHEDKRTSAVGTSDLKSIIFGLH 182 HVLCINLVTE TVEEVIMRRAERKL LSLNV GDNIL+ ++K S VG+ DLKSIIFGLH Sbjct: 1099 HVLCINLVTERTVEEVIMRRAERKLLLSLNVIGDNILKDDNKEPSEVGSGDLKSIIFGLH 1158 Query: 183 MFDPNEIDDGKHRDMDLPEINAMADKVIAMRDEQIVDKDDRKIEVNPRNYLKGYNVKEGG 362 MFDP EI+DG HR+M++PEI AMAD+V+AMRDEQI+D D+RK EVNP N LKG VKE Sbjct: 1159 MFDPTEINDGNHRNMNIPEICAMADRVLAMRDEQILDNDERKFEVNPTNILKGDAVKERD 1218 Query: 363 SASLSCDIGLDEASYLSWVKK 425 SASLSCD+GLDEASYLSWVKK Sbjct: 1219 SASLSCDLGLDEASYLSWVKK 1239 >ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222835143|gb|EEE73578.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 866 Score = 164 bits (416), Expect = 5e-39 Identities = 83/142 (58%), Positives = 108/142 (76%), Gaps = 1/142 (0%) Frame = +3 Query: 3 HVLCINLVTEHTVEEVIMRRAERKLQLSLNVTGDNILEHEDKRTSAVGTSDLKSIIFGLH 182 HVL INLVT H+VEEVIM+RA+RKLQLS +V GD+++E + K T + T DL+SIIFGLH Sbjct: 488 HVLSINLVTRHSVEEVIMQRAKRKLQLSHDVVGDDVMEEDRKETGGIETGDLRSIIFGLH 547 Query: 183 MFDPNEIDDGKHRDMDLPEINAMADKVIAMRDEQIVDKDDRKIEVNPRNYLKGYNVKEGG 362 FDP+E++ K +++ E+ A+A KVIA+R +QI+DKDDRK EVNP KG + GG Sbjct: 548 RFDPSEVNSEKSNELNASELKALAQKVIALRCDQILDKDDRKFEVNPIGQEKGLDFVSGG 607 Query: 363 SASL-SCDIGLDEASYLSWVKK 425 ++L S D GLDEASYLSWV+K Sbjct: 608 ESALASYDPGLDEASYLSWVEK 629 >ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1| helicase, putative [Ricinus communis] Length = 860 Score = 153 bits (386), Expect = 2e-35 Identities = 81/142 (57%), Positives = 107/142 (75%), Gaps = 1/142 (0%) Frame = +3 Query: 3 HVLCINLVTEHTVEEVIMRRAERKLQLSLNVTGDNILEHEDKRTSAVGTSDLKSIIFGLH 182 HVL INLVT HTVEEVIMRRAE+KLQLS NV GD+++E + K V T DL+SIIFGLH Sbjct: 483 HVLSINLVTRHTVEEVIMRRAEKKLQLSNNVLGDDVMEQKGKEPVGVETVDLRSIIFGLH 542 Query: 183 MFDPNEIDDGKHRDMDLPEINAMADKVIAMRDEQIVDKDDRKIEVNPRNYLKGYNVKEGG 362 +FDP+EI K ++++PE+NAM KVI +RD+Q + KD K +++ + KG++V GG Sbjct: 543 IFDPSEIITEKPDELNMPELNAMIVKVIGIRDDQGLAKDGGKYKLDQVDQKKGFDVVTGG 602 Query: 363 -SASLSCDIGLDEASYLSWVKK 425 SA ++ D GLDEASYLSWV++ Sbjct: 603 NSAFINYDPGLDEASYLSWVER 624 >ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis vinifera] Length = 876 Score = 151 bits (382), Expect = 5e-35 Identities = 78/142 (54%), Positives = 104/142 (73%), Gaps = 1/142 (0%) Frame = +3 Query: 3 HVLCINLVTEHTVEEVIMRRAERKLQLSLNVTGDNILEHEDKRTSAVGTSDLKSIIFGLH 182 HVL INLVT TVEE+IMRRAERKLQLS NV G+ ++ E K + DL+S+IFGL Sbjct: 494 HVLSINLVTGRTVEEIIMRRAERKLQLSHNVVGEVDIDREGKEMAGAEAGDLRSVIFGLR 553 Query: 183 MFDPNEIDDGKHRDMDLPEINAMADKVIAMRDEQIVDKDDRKIEVNPRNYLKGYN-VKEG 359 M DP+EI++ + + ++ E++AMADKV+A+R EQ + KDDRK EVNP + LKG++ + + Sbjct: 554 MIDPSEINNDESSEPNMSELDAMADKVVAIRHEQQLGKDDRKFEVNPMDLLKGHDLIMDR 613 Query: 360 GSASLSCDIGLDEASYLSWVKK 425 S S+ D GLDEASYL WV+K Sbjct: 614 SSVSVDFDPGLDEASYLVWVEK 635 >emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera] Length = 1054 Score = 151 bits (382), Expect = 5e-35 Identities = 78/142 (54%), Positives = 104/142 (73%), Gaps = 1/142 (0%) Frame = +3 Query: 3 HVLCINLVTEHTVEEVIMRRAERKLQLSLNVTGDNILEHEDKRTSAVGTSDLKSIIFGLH 182 HVL INLVT TVEE+IMRRAERKLQLS NV G+ ++ E K + DL+S+IFGL Sbjct: 574 HVLSINLVTGRTVEEIIMRRAERKLQLSHNVVGEVDIDREGKEMAGAEAGDLRSVIFGLR 633 Query: 183 MFDPNEIDDGKHRDMDLPEINAMADKVIAMRDEQIVDKDDRKIEVNPRNYLKGYN-VKEG 359 M DP+EI++ + + ++ E++AMADKV+A+R EQ + KDDRK EVNP + LKG++ + + Sbjct: 634 MIDPSEINNDESSEPNMSELDAMADKVVAIRHEQQLGKDDRKFEVNPMDLLKGHDLIMDR 693 Query: 360 GSASLSCDIGLDEASYLSWVKK 425 S S+ D GLDEASYL WV+K Sbjct: 694 SSVSVDFDPGLDEASYLVWVEK 715