BLASTX nr result

ID: Glycyrrhiza24_contig00030184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030184
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glyc...   414   e-113
ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su...   390   e-106
ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic su...   379   e-103
ref|XP_004159268.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   375   e-102
ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|2...   363   2e-98

>ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glycine max]
           gi|3913525|sp|O48901.1|DPOD1_SOYBN RecName: Full=DNA
           polymerase delta catalytic subunit
           gi|2895198|gb|AAC18443.1| DNA polymerase delta [Glycine
           max]
          Length = 1088

 Score =  414 bits (1063), Expect = e-113
 Identities = 201/220 (91%), Positives = 209/220 (95%)
 Frame = +3

Query: 3   ILRDIEQRQSLASRLSKWTRPPLSSEYLSQSRSILFQQLEIDYVIGESHRELLPNSSGPA 182
           ILRDIEQRQ+LA+RLSKWTRPPLS+ Y++QSRS+LFQQLEIDYVI ESH ELLPNSSGP 
Sbjct: 27  ILRDIEQRQALANRLSKWTRPPLSAGYVAQSRSVLFQQLEIDYVIAESHGELLPNSSGPV 86

Query: 183 AIIRIFGVTKEGHSVCCKVHGFEPYFYINCPPGMGPDDISHFHQILEARMREANRNSNVG 362
           AIIRIFGVTKEGHSVCC VHGFEPYFYI CPPGMGPDDISHFHQ LE RMREANRNSNVG
Sbjct: 87  AIIRIFGVTKEGHSVCCNVHGFEPYFYICCPPGMGPDDISHFHQTLEGRMREANRNSNVG 146

Query: 363 KFIRRIEMVQRRSIMYYQQFNSLPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 542
           KF+RRIEMVQRRSIMYYQQ NS PFLKIVVALPTMVASCRGILDRGIQLDGLGMKSF+TY
Sbjct: 147 KFVRRIEMVQRRSIMYYQQSNSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFLTY 206

Query: 543 ESNVLFALRFMIDCNIVGGNWIEIPAGKYKKTAKSLSYCQ 662
           ESNVLFALRFMIDCNIVGGNWI IPAGKYKKTAKSLSYCQ
Sbjct: 207 ESNVLFALRFMIDCNIVGGNWIGIPAGKYKKTAKSLSYCQ 246


>ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
           gi|296088521|emb|CBI37512.3| unnamed protein product
           [Vitis vinifera]
          Length = 1089

 Score =  390 bits (1001), Expect = e-106
 Identities = 185/220 (84%), Positives = 204/220 (92%)
 Frame = +3

Query: 3   ILRDIEQRQSLASRLSKWTRPPLSSEYLSQSRSILFQQLEIDYVIGESHRELLPNSSGPA 182
           ILRDIE R++LASRLSKW RPPLSS YLS S+SI+FQQLEIDYVIGESH+EL+PNSSG A
Sbjct: 54  ILRDIEDRRALASRLSKWARPPLSSAYLSSSQSIVFQQLEIDYVIGESHKELMPNSSGSA 113

Query: 183 AIIRIFGVTKEGHSVCCKVHGFEPYFYINCPPGMGPDDISHFHQILEARMREANRNSNVG 362
           AIIRIFGVT+EGHSVCC VHGFEPYFYI+CPPGMGPDDIS FHQ+LE RMRE NRNS V 
Sbjct: 114 AIIRIFGVTREGHSVCCNVHGFEPYFYISCPPGMGPDDISRFHQVLEGRMREVNRNSRVP 173

Query: 363 KFIRRIEMVQRRSIMYYQQFNSLPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 542
           KF+RRIEMVQ+RSIMYYQ  +S PFLKIVVALPTMV SCRGILDRGIQ++G GMK+F+TY
Sbjct: 174 KFVRRIEMVQKRSIMYYQLQSSHPFLKIVVALPTMVTSCRGILDRGIQIEGFGMKNFVTY 233

Query: 543 ESNVLFALRFMIDCNIVGGNWIEIPAGKYKKTAKSLSYCQ 662
           ESNVLFALRFM+DCNIVGGNWIE+PAGKYKKTAK+LSYCQ
Sbjct: 234 ESNVLFALRFMVDCNIVGGNWIEVPAGKYKKTAKNLSYCQ 273


>ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cucumis
           sativus]
          Length = 1086

 Score =  379 bits (973), Expect = e-103
 Identities = 179/220 (81%), Positives = 199/220 (90%)
 Frame = +3

Query: 3   ILRDIEQRQSLASRLSKWTRPPLSSEYLSQSRSILFQQLEIDYVIGESHRELLPNSSGPA 182
           ILRDIE+RQ+LASR+SKW RPPLS +YLSQS+SI+FQQLEIDYVIGESH+ELLPN SGPA
Sbjct: 51  ILRDIEERQALASRISKWARPPLSQDYLSQSKSIVFQQLEIDYVIGESHKELLPNLSGPA 110

Query: 183 AIIRIFGVTKEGHSVCCKVHGFEPYFYINCPPGMGPDDISHFHQILEARMREANRNSNVG 362
           AI+RIFGVT+EGHSVCC VHGFEPYFYI+CP GMGPDDIS FH+ LEARM+E NRN+   
Sbjct: 111 AILRIFGVTREGHSVCCHVHGFEPYFYISCPSGMGPDDISLFHRTLEARMKEVNRNNKAP 170

Query: 363 KFIRRIEMVQRRSIMYYQQFNSLPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 542
            F+RRIE+VQRRSIMYYQQ     FLKIVVALPTMV SCRGILDRGIQ++G GMKSFMTY
Sbjct: 171 NFVRRIELVQRRSIMYYQQQTFQSFLKIVVALPTMVTSCRGILDRGIQIEGFGMKSFMTY 230

Query: 543 ESNVLFALRFMIDCNIVGGNWIEIPAGKYKKTAKSLSYCQ 662
           ESNVLFALRFMIDCN+VGGNWIE+P GKYKKT +SLSYCQ
Sbjct: 231 ESNVLFALRFMIDCNVVGGNWIEVPVGKYKKTVRSLSYCQ 270


>ref|XP_004159268.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
           subunit-like [Cucumis sativus]
          Length = 573

 Score =  375 bits (962), Expect = e-102
 Identities = 177/220 (80%), Positives = 197/220 (89%)
 Frame = +3

Query: 3   ILRDIEQRQSLASRLSKWTRPPLSSEYLSQSRSILFQQLEIDYVIGESHRELLPNSSGPA 182
           ILRDIE+RQ+LASR+SKW RPPLS +YLSQS+SI+FQQLEIDYVIGESH+ELLPN SGPA
Sbjct: 51  ILRDIEERQALASRISKWARPPLSQDYLSQSKSIVFQQLEIDYVIGESHKELLPNLSGPA 110

Query: 183 AIIRIFGVTKEGHSVCCKVHGFEPYFYINCPPGMGPDDISHFHQILEARMREANRNSNVG 362
           AI+RIFGVT+EGHSVCC VHGFEPYFYI+CP GMGPDDIS FH+ LEARM+E NRN+   
Sbjct: 111 AILRIFGVTREGHSVCCHVHGFEPYFYISCPSGMGPDDISLFHRTLEARMKEVNRNNKAP 170

Query: 363 KFIRRIEMVQRRSIMYYQQFNSLPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTY 542
            F+RRIE+VQRRSIMYYQQ     FLKIVVALPTMV SCRGILDRGIQ++G GMKSFMTY
Sbjct: 171 NFVRRIELVQRRSIMYYQQQTFQSFLKIVVALPTMVTSCRGILDRGIQIEGFGMKSFMTY 230

Query: 543 ESNVLFALRFMIDCNIVGGNWIEIPAGKYKKTAKSLSYCQ 662
           ESNV FALRFMIDCN+VGGNWIE+P GKYKK  +SLSYCQ
Sbjct: 231 ESNVXFALRFMIDCNVVGGNWIEVPVGKYKKXVRSLSYCQ 270


>ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|222856491|gb|EEE94038.1|
           predicted protein [Populus trichocarpa]
          Length = 1081

 Score =  363 bits (931), Expect = 2e-98
 Identities = 170/215 (79%), Positives = 194/215 (90%)
 Frame = +3

Query: 18  EQRQSLASRLSKWTRPPLSSEYLSQSRSILFQQLEIDYVIGESHRELLPNSSGPAAIIRI 197
           ++RQ L SRLSKW RP LS  Y+SQS+SI+FQQLEIDYVIGE+H+ELLP+ SG AAI+RI
Sbjct: 51  KERQVLTSRLSKWARPKLSDGYVSQSQSIIFQQLEIDYVIGETHKELLPDRSGSAAILRI 110

Query: 198 FGVTKEGHSVCCKVHGFEPYFYINCPPGMGPDDISHFHQILEARMREANRNSNVGKFIRR 377
           FGVT EGHSVCC VHGFEPYFY++CPPGM PDDISHFH+ILE +MRE NRN+ V KF+RR
Sbjct: 111 FGVTGEGHSVCCLVHGFEPYFYVSCPPGMNPDDISHFHKILEGKMREVNRNTKVPKFVRR 170

Query: 378 IEMVQRRSIMYYQQFNSLPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVL 557
           IE+V +RSIMYYQQ  S PFLKIVVALPTMV+ CRGILD+GIQ+DGLGM+SFMTYESNVL
Sbjct: 171 IELVHKRSIMYYQQQQSHPFLKIVVALPTMVSGCRGILDKGIQIDGLGMRSFMTYESNVL 230

Query: 558 FALRFMIDCNIVGGNWIEIPAGKYKKTAKSLSYCQ 662
           FALRFMIDCN+VGGNWIE+PAGKYKKT+KSLS CQ
Sbjct: 231 FALRFMIDCNVVGGNWIEVPAGKYKKTSKSLSNCQ 265


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