BLASTX nr result

ID: Glycyrrhiza24_contig00030177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030177
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531470.1| PREDICTED: protein SOMBRERO-like [Glycine max]    114   8e-24
ref|XP_003546845.1| PREDICTED: protein SOMBRERO-like [Glycine max]    105   5e-21
ref|XP_003595868.1| NAC domain-containing protein [Medicago trun...   102   3e-20
gb|AFK34968.1| unknown [Medicago truncatula]                           86   2e-15
ref|XP_002316163.1| NAC domain protein, IPR003441 [Populus trich...    76   3e-12

>ref|XP_003531470.1| PREDICTED: protein SOMBRERO-like [Glycine max]
          Length = 328

 Score =  114 bits (285), Expect = 8e-24
 Identities = 63/85 (74%), Positives = 71/85 (83%), Gaps = 3/85 (3%)
 Frame = +3

Query: 6   CQNILEPTKHHHHMQQGMYNNCTFDGTIHLPQLFSPESTIAP---TSLASSMNAMDILEC 176
           CQ +LEP   HHHMQQG+Y++  FDGT+HLPQLFS ES +AP   +SLASSMNAMDIL+C
Sbjct: 186 CQ-VLEPK--HHHMQQGLYDHYNFDGTMHLPQLFSQESAVAPPTNSSLASSMNAMDILQC 242

Query: 177 SQNLLRLTTTTTGCSGLNLMQHQQQ 251
           SQNLLRL TTTTGC GLNLMQ QQQ
Sbjct: 243 SQNLLRL-TTTTGC-GLNLMQQQQQ 265


>ref|XP_003546845.1| PREDICTED: protein SOMBRERO-like [Glycine max]
          Length = 326

 Score =  105 bits (261), Expect = 5e-21
 Identities = 61/86 (70%), Positives = 68/86 (79%), Gaps = 3/86 (3%)
 Frame = +3

Query: 3   PCQNILEPTKHHHHMQQGMYNNCTFDGTIHLPQLFSPESTIAP---TSLASSMNAMDILE 173
           PCQ +LE  + H HMQ G Y++  FDGT+HLPQLFSPES IAP   +SLA SMNAMDILE
Sbjct: 185 PCQ-VLE--QKHLHMQGGPYDHYNFDGTMHLPQLFSPESAIAPPTNSSLALSMNAMDILE 241

Query: 174 CSQNLLRLTTTTTGCSGLNLMQHQQQ 251
           CSQNLLRL  TTTGC GLNLMQ QQ+
Sbjct: 242 CSQNLLRL--TTTGC-GLNLMQQQQE 264


>ref|XP_003595868.1| NAC domain-containing protein [Medicago truncatula]
           gi|124360182|gb|ABN08195.1| No apical meristem (NAM)
           protein [Medicago truncatula]
           gi|355484916|gb|AES66119.1| NAC domain-containing
           protein [Medicago truncatula]
          Length = 344

 Score =  102 bits (254), Expect = 3e-20
 Identities = 58/86 (67%), Positives = 64/86 (74%), Gaps = 6/86 (6%)
 Frame = +3

Query: 12  NILEPTKHHHHMQQ-GMYN-----NCTFDGTIHLPQLFSPESTIAPTSLASSMNAMDILE 173
           + LEP KHHHHMQQ G+Y+       TFDGTIHLPQLFSPES IA    +   ++MDILE
Sbjct: 190 HFLEP-KHHHHMQQLGLYDYNNNTTTTFDGTIHLPQLFSPESAIAAPPTSFHNSSMDILE 248

Query: 174 CSQNLLRLTTTTTGCSGLNLMQHQQQ 251
           CSQNLLRLTTT T  SGLNLMQ QQQ
Sbjct: 249 CSQNLLRLTTTNTS-SGLNLMQQQQQ 273


>gb|AFK34968.1| unknown [Medicago truncatula]
          Length = 144

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 47/68 (69%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
 Frame = +3

Query: 60  YNN---CTFDGTIHLPQLFSPESTIAPTSLASSMNAMDILECSQNLLRLTTTTTGCSGLN 230
           YNN    TFDGTIHLPQLFSPES IA    +   ++MDILECSQNLLRLTTT T  SGLN
Sbjct: 9   YNNNTTTTFDGTIHLPQLFSPESAIAAPPTSFHNSSMDILECSQNLLRLTTTNTS-SGLN 67

Query: 231 LMQHQQQG 254
            +Q QQQG
Sbjct: 68  FIQQQQQG 75


>ref|XP_002316163.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222865203|gb|EEF02334.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 318

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/67 (56%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = +3

Query: 18  LEPTKHHHHMQQGMYNNCTFDGTIHLPQLFSPESTIAPTSLAS-SMNAMDILECSQNLLR 194
           LEP ++H    Q +Y++ TFDG++HLPQLFSPES +AP+ ++  S+N MD +ECSQNLLR
Sbjct: 187 LEPKQNH---MQSIYDDYTFDGSMHLPQLFSPESAVAPSFVSPLSLNNMDDIECSQNLLR 243

Query: 195 LTTTTTG 215
           LT+T  G
Sbjct: 244 LTSTGCG 250


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