BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030170
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_197032.1| pentatricopeptide repeat-containing protein [Ar...    57   2e-06
ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06
ref|XP_002871658.1| pentatricopeptide repeat-containing protein ...    56   3e-06

>ref|NP_197032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180846|sp|Q9LXF4.1|PP384_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g15280 gi|7671497|emb|CAB89338.1| putative protein
           [Arabidopsis thaliana] gi|332004760|gb|AED92143.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 1227

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/65 (52%), Positives = 41/65 (63%)
 Frame = +2

Query: 110 SLLSREPSLSNNARARAGSSLKTHLLELFTVVPGITRQFWRVPALRPEHVLQILLGFQSE 289
           +LLSR    S   R   GSSLK  L +L  VVP ITR+F R P L+PE VL++ LGF+SE
Sbjct: 60  NLLSR----SKEKRDLTGSSLKDLLFDLSDVVPNITRRFRRFPGLKPEDVLELSLGFESE 115

Query: 290 CVRVG 304
             R G
Sbjct: 116 LQRGG 120


>ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Glycine max]
          Length = 1186

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/56 (55%), Positives = 34/56 (60%)
 Frame = +2

Query: 134 LSNNARARAGSSLKTHLLELFTVVPGITRQFWRVPALRPEHVLQILLGFQSECVRV 301
           L NNA      SLK HLLEL   +P  TR  WR+PAL P HVLQ+LL  QS  V V
Sbjct: 33  LDNNA------SLKPHLLELSLAIPETTRTCWRLPALGPSHVLQLLLALQSHSVTV 82


>ref|XP_002871658.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317495|gb|EFH47917.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1223

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +2

Query: 110 SLLSREPSLSNNARARAGSSLKTHLLELFTVVPGITRQFWRVPALRPEHVLQILLGFQSE 289
           +LLSR    SN      GSSLK  LL+L  V+P I R+F R P L+PE+V+++LLGF+SE
Sbjct: 56  NLLSR----SNEKLDLTGSSLKDLLLDLSDVIPNIIRRFRRFPGLKPENVVELLLGFESE 111

Query: 290 CVR 298
             R
Sbjct: 112 LQR 114