BLASTX nr result

ID: Glycyrrhiza24_contig00030169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030169
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512002.1| conserved hypothetical protein [Ricinus comm...    68   7e-10
ref|XP_002887523.1| hypothetical protein ARALYDRAFT_476547 [Arab...    55   5e-06

>ref|XP_002512002.1| conserved hypothetical protein [Ricinus communis]
           gi|223549182|gb|EEF50671.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/76 (52%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
 Frame = -1

Query: 294 PFFAVMSVLTLLAVLSCYLGRRWSRRATTT-----PLESITRDTNRDYFGWVKRLYRECT 130
           PFF V+SVLT+LA+LSC LGR  SRRA        P+ +I    +RDYFGW+KR  R C 
Sbjct: 45  PFFGVISVLTVLAILSCILGRVCSRRAEAAVGGGGPVGAI---KHRDYFGWMKRKSRWCR 101

Query: 129 AISKHVGAKVMVYGQE 82
                VGAKVM   QE
Sbjct: 102 GGDVEVGAKVMALDQE 117


>ref|XP_002887523.1| hypothetical protein ARALYDRAFT_476547 [Arabidopsis lyrata subsp.
           lyrata] gi|297333364|gb|EFH63782.1| hypothetical protein
           ARALYDRAFT_476547 [Arabidopsis lyrata subsp. lyrata]
          Length = 144

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 13/123 (10%)
 Frame = -1

Query: 429 MATAEPSSIVTPDQQQ--QAGPGSTSNPEAVPIXXXXXXXXXXXXXG----PFFAVMSVL 268
           MA++  +S + P QQQ  Q   G+   P A  +                  PFFAV+SVL
Sbjct: 3   MASSSSNSSLFPTQQQPQQQLGGNEFQPTATNVNLIAAPNAPNHYSSGSIGPFFAVISVL 62

Query: 267 TLLAVLSCYLGRRWSRR-------ATTTPLESITRDTNRDYFGWVKRLYRECTAISKHVG 109
            +LAVLSC+LGR  +RR       A   PLE I    +  + GW++R +R   A     G
Sbjct: 63  VVLAVLSCFLGRICARRRQRTVLVAEVNPLEMI---KSGGFLGWLRRKWRRFLAGDVEAG 119

Query: 108 AKV 100
           AKV
Sbjct: 120 AKV 122


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