BLASTX nr result

ID: Glycyrrhiza24_contig00030155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030155
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...   132   2e-29
emb|CBI34941.3| unnamed protein product [Vitis vinifera]              108   5e-22
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...    98   6e-19
ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-b...    92   6e-17
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain...    92   6e-17

>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2164

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/102 (58%), Positives = 79/102 (77%)
 Frame = -2

Query: 348  FLLKFLCDELLNTSLIRQHLEQCAELSVELHQKLRALSVEWKSLKTKEDNLSTKAAKIDT 169
            FL KFLCDELLNT+LIRQHLEQCAE S EL QKLR++SVEWK+LK KE+NL+ +A K+D+
Sbjct: 1323 FLFKFLCDELLNTALIRQHLEQCAESSAELQQKLRSISVEWKNLKLKEENLAARAPKVDS 1382

Query: 168  FSQNTTGEVGHKEGFTSLFSNTSKCLVQPHTVTDNPSNFGVI 43
                  GEVG + G +S  +N  KC+ +PHT++D P +FG++
Sbjct: 1383 GMIYVAGEVGTEGGLSSALTNNGKCIAKPHTLSDRPKDFGIL 1424


>emb|CBI34941.3| unnamed protein product [Vitis vinifera]
          Length = 1907

 Score =  108 bits (270), Expect = 5e-22
 Identities = 55/103 (53%), Positives = 73/103 (70%), Gaps = 5/103 (4%)
 Frame = -2

Query: 348  FLLKFLCDELLNTSLIRQHLEQCAELSVELHQKLRALSVEWKSLKTKEDNLSTKAAKIDT 169
            FL KFLCDELLNT+LIRQHLEQCAE S EL QKLR++SVEWK+LK KE+NL+ +A K+D+
Sbjct: 1210 FLFKFLCDELLNTALIRQHLEQCAESSAELQQKLRSISVEWKNLKLKEENLAARAPKVDS 1269

Query: 168  FSQNTTGEVGHKEGFTSLFSNTSKCL-----VQPHTVTDNPSN 55
                  GEVG + G +S  +N  K       ++P+ +  +PS+
Sbjct: 1270 GMIYVAGEVGTEGGLSSALTNNGKLEGGSEGIRPNGLDKHPSS 1312


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
            gi|223543360|gb|EEF44891.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2145

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/98 (52%), Positives = 68/98 (69%)
 Frame = -2

Query: 348  FLLKFLCDELLNTSLIRQHLEQCAELSVELHQKLRALSVEWKSLKTKEDNLSTKAAKIDT 169
            FLLKFLCDELLN++L+RQHLEQC E + E+ QKLR L  EWK+LK+KE+ ++ K+AK+ T
Sbjct: 1325 FLLKFLCDELLNSALVRQHLEQCMESTAEVQQKLRTLYAEWKNLKSKEEFMALKSAKMGT 1384

Query: 168  FSQNTTGEVGHKEGFTSLFSNTSKCLVQPHTVTDNPSN 55
                 +GEV  KEG  S   +  K + QP  + D PS+
Sbjct: 1385 ---GASGEV--KEGLVSALKDQGKSVGQPPVLGDKPSD 1417


>ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding
           domain-containing protein 9-like [Cucumis sativus]
          Length = 1277

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 53/131 (40%), Positives = 76/131 (58%), Gaps = 18/131 (13%)
 Frame = -2

Query: 348 FLLKFLCDELLNTSLIRQHLEQCAELSVELHQKLRALSVEWKSLKTKEDNLSTKAAKIDT 169
           FLLK+LCDELL+++LIRQHLEQC E   EL QKLR+  +EWK+LK +E+ ++ +AAK+DT
Sbjct: 467 FLLKYLCDELLSSALIRQHLEQCVEALAELQQKLRSCFIEWKNLKCREEVVAARAAKLDT 526

Query: 168 FSQNTTGE---------VGHKEGFTSLFSNTSKC---------LVQPHTVTDNPSNFGVI 43
              +   E         +G  + ++SL S  +KC         +   H VTDN    G +
Sbjct: 527 TMLSAVREGQGSCDGARLGASDQYSSLTSLENKCHNHASFQEQMSSAHDVTDNNDAGGNV 586

Query: 42  VDSIPSEEITK 10
           + S  S+   K
Sbjct: 587 LSSSGSQNSGK 597


>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
            [Cucumis sativus]
          Length = 2131

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 53/131 (40%), Positives = 76/131 (58%), Gaps = 18/131 (13%)
 Frame = -2

Query: 348  FLLKFLCDELLNTSLIRQHLEQCAELSVELHQKLRALSVEWKSLKTKEDNLSTKAAKIDT 169
            FLLK+LCDELL+++LIRQHLEQC E   EL QKLR+  +EWK+LK +E+ ++ +AAK+DT
Sbjct: 1321 FLLKYLCDELLSSALIRQHLEQCVEALAELQQKLRSCFIEWKNLKCREEVVAARAAKLDT 1380

Query: 168  FSQNTTGE---------VGHKEGFTSLFSNTSKC---------LVQPHTVTDNPSNFGVI 43
               +   E         +G  + ++SL S  +KC         +   H VTDN    G +
Sbjct: 1381 TMLSAVREGQGSCDGARLGASDQYSSLTSLENKCHNHASFQEQMSSAHDVTDNNDAGGNV 1440

Query: 42   VDSIPSEEITK 10
            + S  S+   K
Sbjct: 1441 LSSSGSQNSGK 1451


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