BLASTX nr result

ID: Glycyrrhiza24_contig00030154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030154
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548593.1| PREDICTED: golgin candidate 1-like [Glycine ...   153   1e-35
ref|XP_003517645.1| PREDICTED: golgin candidate 1-like [Glycine ...   147   1e-33
ref|XP_002514234.1| Golgin-84, putative [Ricinus communis] gi|22...    82   6e-14
emb|CBI28011.3| unnamed protein product [Vitis vinifera]               79   3e-13
ref|XP_004150848.1| PREDICTED: golgin candidate 1-like [Cucumis ...    73   3e-11

>ref|XP_003548593.1| PREDICTED: golgin candidate 1-like [Glycine max]
          Length = 702

 Score =  153 bits (387), Expect = 1e-35
 Identities = 87/126 (69%), Positives = 96/126 (76%), Gaps = 4/126 (3%)
 Frame = +1

Query: 34  MASWLKAAEDLFEVVDRRAKLVA----EEQSDSKSPASNGQESQGKRMKSKPKAQKGPSN 201
           M SWLKAAE LFEVVDRRAK VA    EEQ DSKSPASNGQ SQGKR KSKPKAQK  S+
Sbjct: 1   MDSWLKAAEGLFEVVDRRAKAVASDLSEEQGDSKSPASNGQGSQGKRTKSKPKAQKALSD 60

Query: 202 PSTIASDATKEKSGSPAVPVVVTTPRDQVDLVAKNDEIASISTDQPKEQQPTDATSPMLG 381
             TI SD T EKSGSP+ PV + T  D+VD   + D  AS ST+QPKE QP+DATSP+LG
Sbjct: 61  SPTIISDTTHEKSGSPSAPVDIATSIDKVD--PEIDVSASTSTNQPKEPQPSDATSPLLG 118

Query: 382 ASLSKI 399
           +SLSKI
Sbjct: 119 SSLSKI 124


>ref|XP_003517645.1| PREDICTED: golgin candidate 1-like [Glycine max]
          Length = 703

 Score =  147 bits (370), Expect = 1e-33
 Identities = 83/126 (65%), Positives = 95/126 (75%), Gaps = 4/126 (3%)
 Frame = +1

Query: 34  MASWLKAAEDLFEVVDRRAKLVA----EEQSDSKSPASNGQESQGKRMKSKPKAQKGPSN 201
           M SWLKAAE LFEVVDRRAK VA    EEQ D KSPASNGQ SQGK+ KSKPKAQKG S+
Sbjct: 1   MDSWLKAAEGLFEVVDRRAKAVASDLSEEQGDLKSPASNGQGSQGKKTKSKPKAQKGLSD 60

Query: 202 PSTIASDATKEKSGSPAVPVVVTTPRDQVDLVAKNDEIASISTDQPKEQQPTDATSPMLG 381
            ST  SD T+EKSGSP+ P  + T  D+VD     D  AS ST+QPKE +P+DATSP+LG
Sbjct: 61  SSTTISDTTQEKSGSPSAPADIATSIDKVD-PEIIDGSASTSTNQPKEPRPSDATSPLLG 119

Query: 382 ASLSKI 399
           +SLSK+
Sbjct: 120 SSLSKM 125


>ref|XP_002514234.1| Golgin-84, putative [Ricinus communis] gi|223546690|gb|EEF48188.1|
           Golgin-84, putative [Ricinus communis]
          Length = 717

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 53/104 (50%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
 Frame = +1

Query: 34  MASWLKAAEDLFEVVDRRAKLV----AEEQSDSKSPASNGQESQGKRMKSKPKAQKGPSN 201
           MASWLKAAEDLFEVVDRRAKLV    A+E SDS+SPASNGQ SQ K  + K KAQK    
Sbjct: 1   MASWLKAAEDLFEVVDRRAKLVVSELADEHSDSQSPASNGQGSQPKTARGKKKAQK---R 57

Query: 202 PSTIASDATKEKSGSPAVPVVVTTPRDQVDLVAKNDEIASISTD 333
            S I SD       S A    +TT   Q+++ +++    S+  D
Sbjct: 58  LSKIESD-----KASSAKAEFITTQTSQLEMESEDRAALSVEHD 96


>emb|CBI28011.3| unnamed protein product [Vitis vinifera]
          Length = 712

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 56/115 (48%), Positives = 69/115 (60%), Gaps = 9/115 (7%)
 Frame = +1

Query: 34  MASWLKAAEDLFEVVDRRAKLV----AEEQSDSKSPASNGQESQGKRM--KSKPKAQK-- 189
           MASWLKAAEDLFEVVDRRAKLV    ++EQ D ++P SNGQ SQ K+   KSK KAQK  
Sbjct: 1   MASWLKAAEDLFEVVDRRAKLVVSELSDEQHDGQAPDSNGQGSQTKKTKPKSKSKAQKRL 60

Query: 190 GPSNPSTIASDATKEKSGSPAVPVVVTTPRDQVDLVAKNDE-IASISTDQPKEQQ 351
             + PS I   A  +    PAV   +   +D+     +NDE  +S ST Q   +Q
Sbjct: 61  STNEPSKINDTAQVQTGTQPAVS-DIAPDKDRATRSFENDETTSSNSTAQANNEQ 114


>ref|XP_004150848.1| PREDICTED: golgin candidate 1-like [Cucumis sativus]
           gi|449488127|ref|XP_004157946.1| PREDICTED: golgin
           candidate 1-like [Cucumis sativus]
          Length = 709

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 9/124 (7%)
 Frame = +1

Query: 34  MASWLKAAEDLFEVVDRRAKLV----AEEQSDSKSPASNGQESQGKRMKSKPKAQKGPSN 201
           MASW KAAE LFEVVDR+AKLV    +EEQS++++ ASNGQ SQ K+ K K K +K  SN
Sbjct: 1   MASWFKAAEGLFEVVDRKAKLVVSELSEEQSNAQTAASNGQGSQTKKTKPK-KKKKVLSN 59

Query: 202 PSTIASDATKEKSGSPAVPVVVTTPRDQVDLVAKNDEIASISTDQP---KEQQP--TDAT 366
               AS   +E+S + A    V     +  +V+  ++   IS   P    E++P   D T
Sbjct: 60  ELPTASATPEEQSSTLASKADVVLSPGKHGIVSSTEDDRMISDKSPTQVNERKPDDNDNT 119

Query: 367 SPML 378
            P+L
Sbjct: 120 IPVL 123


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