BLASTX nr result

ID: Glycyrrhiza24_contig00030140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030140
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543414.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   164   9e-39
ref|XP_003540287.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   161   5e-38
ref|XP_002313503.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
ref|XP_002298264.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
ref|XP_002275500.2| PREDICTED: E3 ubiquitin-protein ligase PUB23...   155   4e-36

>ref|XP_003543414.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Glycine max]
          Length = 403

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/113 (72%), Positives = 92/113 (81%), Gaps = 3/113 (2%)
 Frame = -1

Query: 330 MDEIEVPPHFLCPISLQLMRDPVTVSTGITYDRENIERWLFSCKNINSTCPVTKQPLSHT 151
           MDEIE+P HFLCPISLQLMRDPVTV TGITYDRENIERWLFSCK  N+TCPVTKQ L + 
Sbjct: 1   MDEIEIPAHFLCPISLQLMRDPVTVCTGITYDRENIERWLFSCK--NNTCPVTKQCLLNH 58

Query: 150 DLTPNHTLHRLIRSWCT---RFGIETIQTTPKPTIDKTHVFKLISEAKMFPDK 1
           DLTPNHTL RLI+SWCT     G+E I  TPK  ID+T + KL++EAK FP+K
Sbjct: 59  DLTPNHTLRRLIQSWCTLNASLGVERI-PTPKSPIDRTQIVKLLTEAKRFPEK 110


>ref|XP_003540287.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Glycine max]
          Length = 403

 Score =  161 bits (408), Expect = 5e-38
 Identities = 82/113 (72%), Positives = 90/113 (79%), Gaps = 3/113 (2%)
 Frame = -1

Query: 330 MDEIEVPPHFLCPISLQLMRDPVTVSTGITYDRENIERWLFSCKNINSTCPVTKQPLSHT 151
           MDEIE+P HFLCPISLQLMRDPVTV TGITYDRENIERWLFSCK  N+TCPVTKQ L   
Sbjct: 1   MDEIEIPAHFLCPISLQLMRDPVTVCTGITYDRENIERWLFSCK--NNTCPVTKQCLLDH 58

Query: 150 DLTPNHTLHRLIRSWCT---RFGIETIQTTPKPTIDKTHVFKLISEAKMFPDK 1
            LTPNHTL RLI+SWCT     G+E I  TPK  IDKT + KL++EAK FP+K
Sbjct: 59  GLTPNHTLRRLIQSWCTLNASLGVERI-PTPKSPIDKTQIVKLLTEAKRFPEK 110


>ref|XP_002313503.1| predicted protein [Populus trichocarpa] gi|222849911|gb|EEE87458.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  159 bits (403), Expect = 2e-37
 Identities = 79/111 (71%), Positives = 91/111 (81%), Gaps = 3/111 (2%)
 Frame = -1

Query: 330 MDEIEVPPHFLCPISLQLMRDPVTVSTGITYDRENIERWLFSCKNINSTCPVTKQPLSHT 151
           MD+I+VP HFLCPISLQLMRDPVT+STGITYDRENIERWLFSCK  N+TCPVTKQ L   
Sbjct: 1   MDQIDVPYHFLCPISLQLMRDPVTISTGITYDRENIERWLFSCK--NNTCPVTKQELFGK 58

Query: 150 DLTPNHTLHRLIRSWCT---RFGIETIQTTPKPTIDKTHVFKLISEAKMFP 7
           DLTPNHTL RLI++WCT    FGIE I  TPKP I++  + KL+++AK FP
Sbjct: 59  DLTPNHTLRRLIQAWCTLNASFGIERI-PTPKPPIERAQIAKLLNDAKKFP 108


>ref|XP_002298264.1| predicted protein [Populus trichocarpa] gi|222845522|gb|EEE83069.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/111 (71%), Positives = 89/111 (80%), Gaps = 3/111 (2%)
 Frame = -1

Query: 330 MDEIEVPPHFLCPISLQLMRDPVTVSTGITYDRENIERWLFSCKNINSTCPVTKQPLSHT 151
           MD+I+VP HFLCPISLQLMRDPVTVSTGITYDRENIE+WLFSCK  N TCPVTKQ L   
Sbjct: 1   MDQIDVPYHFLCPISLQLMRDPVTVSTGITYDRENIEKWLFSCK--NKTCPVTKQELFTK 58

Query: 150 DLTPNHTLHRLIRSWCT---RFGIETIQTTPKPTIDKTHVFKLISEAKMFP 7
           DLTPNHTL RLI++WCT    FGIE I  TPKP  D+  + KL+++AK FP
Sbjct: 59  DLTPNHTLRRLIQAWCTLNASFGIERI-PTPKPLADRAQISKLLNDAKKFP 108


>ref|XP_002275500.2| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 414

 Score =  155 bits (391), Expect = 4e-36
 Identities = 77/111 (69%), Positives = 88/111 (79%), Gaps = 3/111 (2%)
 Frame = -1

Query: 330 MDEIEVPPHFLCPISLQLMRDPVTVSTGITYDRENIERWLFSCKNINSTCPVTKQPLSHT 151
           MDEI+VP HF+CPISLQLMRDPVTV+TGITYDRENIERWLFSCK  N+TCP TKQ L  T
Sbjct: 1   MDEIDVPSHFMCPISLQLMRDPVTVATGITYDRENIERWLFSCK--NNTCPFTKQVLVDT 58

Query: 150 DLTPNHTLHRLIRSWC---TRFGIETIQTTPKPTIDKTHVFKLISEAKMFP 7
           DLTPNHTL RLI++WC      G+E I  TPKP IDK  + KL+++A  FP
Sbjct: 59  DLTPNHTLRRLIQAWCIVNACHGVERI-PTPKPPIDKAQIIKLLNDAIKFP 108


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