BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030134
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   216   2e-54
ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi...   210   8e-53
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   175   4e-42
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   175   4e-42
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   171   4e-41

>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  216 bits (550), Expect = 2e-54
 Identities = 104/151 (68%), Positives = 123/151 (81%), Gaps = 2/151 (1%)
 Frame = -3

Query: 447 RSHNFCFPDTHQKLYFSSKP--NSIVELVLTNDWSQGVEHELEKCRPSLTHETVLYVLKQ 274
           RSH+  FP TH KLYFS+KP  NSIVEL+LTNDWSQ +E +LE   PS+ HETVLYV+K+
Sbjct: 43  RSHHLRFPITHHKLYFSTKPKPNSIVELLLTNDWSQALELKLENRFPSMPHETVLYVIKR 102

Query: 273 LDKNPEKASCFFNWVSKREWFRASSSVFSLILRVLANKEMMKQFWITLRTMKERGFYLDE 94
           LDKNPEKASCFFNWV K+ WFR S SV+SLI+R+LA K+ MKQFW+TLR MKE GF+LDE
Sbjct: 103 LDKNPEKASCFFNWVCKKVWFRPSCSVYSLIVRILAAKDTMKQFWVTLRMMKENGFFLDE 162

Query: 93  ETYRTILTGFTKSKMNTDCAALTHFYNGMLK 1
           ETY TI  GF + KM++D  ALTHFYN ML+
Sbjct: 163 ETYLTISVGFKREKMDSDSVALTHFYNRMLE 193



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/120 (31%), Positives = 63/120 (52%)
 Frame = -3

Query: 387 NSIVELVLTNDWSQGVEHELEKCRPSLTHETVLYVLKQLDKNPEKASCFFNWVSKREWFR 208
           +++V ++  ++W   V  EL K    L+   V+ VLK+L K P KA  FF+WV K+  + 
Sbjct: 202 SNVVGIISRSEWGDEVVGELAKLEIQLSDNFVIRVLKELRKTPLKAYKFFHWVGKQSGYE 261

Query: 207 ASSSVFSLILRVLANKEMMKQFWITLRTMKERGFYLDEETYRTILTGFTKSKMNTDCAAL 28
             +  ++ + RVL   E +++FW  +  MK  G  LD +TY  I     +++M  D   L
Sbjct: 262 HDTVTYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYIKITRQLQRNRMMEDAVKL 321


>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  210 bits (535), Expect = 8e-53
 Identities = 97/144 (67%), Positives = 117/144 (81%)
 Frame = -3

Query: 444 SHNFCFPDTHQKLYFSSKPNSIVELVLTNDWSQGVEHELEKCRPSLTHETVLYVLKQLDK 265
           SH+F  P+ HQ LYFSSKPNSIVELVLT+DWS+G+E ELEKC PS+THETV+YVLK+++ 
Sbjct: 50  SHHFLLPNIHQNLYFSSKPNSIVELVLTSDWSKGLEQELEKCYPSMTHETVVYVLKRMEA 109

Query: 264 NPEKASCFFNWVSKREWFRASSSVFSLILRVLANKEMMKQFWITLRTMKERGFYLDEETY 85
           NPEKA CFFNWVS +EW+R SSS++ LILRVLA +E +K FWITLRTMK +GFY DEE Y
Sbjct: 110 NPEKAWCFFNWVSAKEWYRPSSSLYGLILRVLATEETIKLFWITLRTMKTKGFYFDEEMY 169

Query: 84  RTILTGFTKSKMNTDCAALTHFYN 13
             IL GF +  MN D  +LT FY+
Sbjct: 170 FPILAGFKRKNMNKDRVSLTRFYS 193



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/118 (33%), Positives = 61/118 (51%)
 Frame = -3

Query: 381 IVELVLTNDWSQGVEHELEKCRPSLTHETVLYVLKQLDKNPEKASCFFNWVSKREWFRAS 202
           +V+++  ++W   V   L K    ++   V  VLK+L   P KA  FFNWV K+  +   
Sbjct: 208 VVDIISGSEWGDEVMSNLAKLEIRMSDNFVTRVLKELRNCPLKAYEFFNWVGKQSGYEHD 267

Query: 201 SSVFSLILRVLANKEMMKQFWITLRTMKERGFYLDEETYRTILTGFTKSKMNTDCAAL 28
           +  ++ I RVLA+ + +++FW  +  MK  G  LD +TY  I     K+KM  D   L
Sbjct: 268 TVTYNAIARVLASTDSIEKFWSVIEEMKSVGHELDIDTYIKISKKLQKNKMMEDAVKL 325


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/143 (59%), Positives = 103/143 (72%)
 Frame = -3

Query: 429 FPDTHQKLYFSSKPNSIVELVLTNDWSQGVEHELEKCRPSLTHETVLYVLKQLDKNPEKA 250
           F   H  L+FSS P S+++LV TNDWS+ +E ELE   P+LTHETV+YVLK+LDK P+KA
Sbjct: 45  FTINHPVLFFSSNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKA 104

Query: 249 SCFFNWVSKREWFRASSSVFSLILRVLANKEMMKQFWITLRTMKERGFYLDEETYRTILT 70
           S FFNW S +     SSS++S++LR+    E MK FWITLR MKERGFYLDEETY+TIL 
Sbjct: 105 SEFFNWASGKNGSTQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILG 164

Query: 69  GFTKSKMNTDCAALTHFYNGMLK 1
              KSK   D   LTHFYN ML+
Sbjct: 165 VLRKSKKAADATGLTHFYNRMLQ 187



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/129 (33%), Positives = 68/129 (52%)
 Frame = -3

Query: 414 QKLYFSSKPNSIVELVLTNDWSQGVEHELEKCRPSLTHETVLYVLKQLDKNPEKASCFFN 235
           Q+    S    +V++VL +DWS  V  +LE+   +L+   V+ VLK+L  +P KA  FF+
Sbjct: 187 QQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLKALSFFH 246

Query: 234 WVSKREWFRASSSVFSLILRVLANKEMMKQFWITLRTMKERGFYLDEETYRTILTGFTKS 55
           WV  R  +  ++  ++ I RVL   + ++ FW  +  MK     +D +TY  I   F KS
Sbjct: 247 WVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQFQKS 306

Query: 54  KMNTDCAAL 28
           KM  +   L
Sbjct: 307 KMMGEAVKL 315


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  175 bits (443), Expect = 4e-42
 Identities = 88/150 (58%), Positives = 114/150 (76%), Gaps = 1/150 (0%)
 Frame = -3

Query: 447 RSHNFCFPDT-HQKLYFSSKPNSIVELVLTNDWSQGVEHELEKCRPSLTHETVLYVLKQL 271
           +S+   FP   + KL+FSSKPNSIVELVL NDWS  +E ELEK    LTHETV+YVLK+L
Sbjct: 45  QSYTSAFPYILYGKLFFSSKPNSIVELVLENDWSDELESELEKSSSVLTHETVIYVLKKL 104

Query: 270 DKNPEKASCFFNWVSKREWFRASSSVFSLILRVLANKEMMKQFWITLRTMKERGFYLDEE 91
           DK+P++   FFNWV+++  FR SS+++SLILR L + E MKQFW+T+R MKE+GF +D+E
Sbjct: 105 DKDPQRTWNFFNWVTEKNGFRPSSAMYSLILRSLVHGESMKQFWVTIRKMKEQGFCIDKE 164

Query: 90  TYRTILTGFTKSKMNTDCAALTHFYNGMLK 1
           TY TIL  F K KM ++  ALTHFYN M++
Sbjct: 165 TYLTILGVFKKGKMASEEVALTHFYNRMVQ 194



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 43/118 (36%), Positives = 65/118 (55%)
 Frame = -3

Query: 381 IVELVLTNDWSQGVEHELEKCRPSLTHETVLYVLKQLDKNPEKASCFFNWVSKREWFRAS 202
           +VELV  + WS  VE +L + + S +   VL+VL++L   P KA  FF WV +   +  S
Sbjct: 205 VVELVTMSVWSSEVEKKLGELKNSFSDNFVLHVLRELRGYPLKALRFFQWVGECPGYEHS 264

Query: 201 SSVFSLILRVLANKEMMKQFWITLRTMKERGFYLDEETYRTILTGFTKSKMNTDCAAL 28
           S  +++I RVL   + + +FW  +  MK +G  +D +TY  I   F K+KM  D   L
Sbjct: 265 SITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTYIKISRQFQKNKMLEDAVKL 322


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  171 bits (434), Expect = 4e-41
 Identities = 83/151 (54%), Positives = 110/151 (72%), Gaps = 2/151 (1%)
 Frame = -3

Query: 447 RSHNFC--FPDTHQKLYFSSKPNSIVELVLTNDWSQGVEHELEKCRPSLTHETVLYVLKQ 274
           R H++   + + H+KLY SSKP+S+VEL+  NDWS  +E +LE   P LTHETV+YVLK+
Sbjct: 42  REHSYTSDYVNIHKKLYSSSKPSSLVELLSVNDWSPELETQLENSSPLLTHETVIYVLKK 101

Query: 273 LDKNPEKASCFFNWVSKREWFRASSSVFSLILRVLANKEMMKQFWITLRTMKERGFYLDE 94
           LDK+P KA  FFNWV  R  F+ SS ++SL+LR+L  K+ MK FWITLR MKE+GFY DE
Sbjct: 102 LDKDPHKAWDFFNWVCDRNGFKPSSPLYSLMLRILVKKDSMKNFWITLRKMKEQGFYTDE 161

Query: 93  ETYRTILTGFTKSKMNTDCAALTHFYNGMLK 1
           ETY TIL  F K +M++D  A  HF++ M++
Sbjct: 162 ETYLTILGVFRKERMDSDAVAFKHFFDRMVE 192



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 44/122 (36%), Positives = 63/122 (51%)
 Frame = -3

Query: 384 SIVELVLTNDWSQGVEHELEKCRPSLTHETVLYVLKQLDKNPEKASCFFNWVSKREWFRA 205
           ++V +V   +WS  VE ELE     LT   V+ VLK+L   P KA  FFNW  K E +  
Sbjct: 202 NVVSVVSATEWSNEVEKELEGMGILLTDNFVIRVLKELRNYPLKALQFFNWAGKCERYEC 261

Query: 204 SSSVFSLILRVLANKEMMKQFWITLRTMKERGFYLDEETYRTILTGFTKSKMNTDCAALT 25
           ++  ++ I RVL   + + +FW  +  MK  G  +D +TY  I   F K+K+  D   L 
Sbjct: 262 NTITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIKISRQFQKNKLMGDAVKLY 321

Query: 24  HF 19
            F
Sbjct: 322 EF 323