BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030131
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containi...   492   e-137
ref|XP_002533788.1| pentatricopeptide repeat-containing protein,...   325   9e-87
emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]   320   2e-85
ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|2...   313   4e-83
ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   303   5e-80

>ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containing protein At4g17616-like
            [Glycine max]
          Length = 684

 Score =  492 bits (1266), Expect = e-137
 Identities = 249/310 (80%), Positives = 271/310 (87%)
 Frame = +1

Query: 4    KEYRNNLQKPCFMAIGSPNLKNALKIHTEPELLQKDSVLKVESRVGLVFYTGGKLVLSNR 183
            KE   +LQKPCF+AIGSP L+  LKIH EPELL KDSVLKVESR  L+FY GGKLVLSN 
Sbjct: 324  KECEKHLQKPCFIAIGSPFLRTVLKIHIEPELLHKDSVLKVESRQDLIFYKGGKLVLSNS 383

Query: 184  ALAKFISGYKKDGRTSELSKLLLSIQEGLYSVAGSSLCSAAIGACIQMGWLVSAHDILDD 363
            ALAKFISGYKK GR  ELSKLLLSIQ  L SVAGSSLCS  IGACIQ+GWL  AHDILDD
Sbjct: 384  ALAKFISGYKKYGRIGELSKLLLSIQGELNSVAGSSLCSDVIGACIQLGWLECAHDILDD 443

Query: 364  VEATGSPMGWDTYMLLLSAYQKGGMQREAKALVKQMKMIYSDKELSHDAIDKHILGEETS 543
            VEATGSPMG DTYMLL+SAYQKGGMQRE KAL+KQMK +  DK LS DAID+H L EET 
Sbjct: 444  VEATGSPMGRDTYMLLVSAYQKGGMQRETKALLKQMKKVGLDKGLSDDAIDEHNLCEETL 503

Query: 544  NSAGKSDLAVTLAQILKDKDQTVFPLVYNFNSSIFFFCKARMIEDALKAYRRMGEMKIQP 723
            NS GK+DLA+ L QILKD+DQTVFPLVYN NSSIFFFCKA MIEDAL+AYRRM +MKIQP
Sbjct: 504  NSLGKADLAIALVQILKDEDQTVFPLVYNLNSSIFFFCKAGMIEDALRAYRRMVDMKIQP 563

Query: 724  TSQTFAYMVCGYSSLGMYREITILWGDIKRFMKNGNLVGNRDLYELLLLNFIQGGYFERV 903
            TSQTFA+++CGYSSLGMYREITILWGDIKRFM++GNLVGNRDLYELLLLNF++GGYFERV
Sbjct: 564  TSQTFAFLMCGYSSLGMYREITILWGDIKRFMRSGNLVGNRDLYELLLLNFLRGGYFERV 623

Query: 904  MEVIGHMRDH 933
            +EVI HMRDH
Sbjct: 624  LEVISHMRDH 633


>ref|XP_002533788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223526289|gb|EEF28601.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 689

 Score =  325 bits (833), Expect = 9e-87
 Identities = 175/313 (55%), Positives = 227/313 (72%), Gaps = 3/313 (0%)
 Frame = +1

Query: 1    NKEYRNNLQKPCFMAIGSPNLKNALKIHTEPELLQKDSVLKVESRVGLVFYTGGKLVLSN 180
            NK+ +N+ QKPC ++IGS NL+  LKI   PE+LQK+SV++VE   GL+    GKL+LSN
Sbjct: 327  NKKPKND-QKPCLVSIGSQNLRAGLKIQILPEVLQKESVIRVEHGKGLLSSKNGKLLLSN 385

Query: 181  RALAKFISGYKKDGRTSELSKLLLSIQEGLYSVAGSSLCSAAIGACIQMGWLVSAHDILD 360
            RALA FI GYK+ GR SEL+K+LLS+Q+   ++  SSLCS  IGAC  +GWL +AHDILD
Sbjct: 386  RALANFIHGYKRQGRISELTKVLLSMQKDFQTIGESSLCSDVIGACACLGWLETAHDILD 445

Query: 361  DVEATGSPMGWDTYMLLLSAYQKGGMQREAKALVKQMKMIYSDKELSHDAIDKHILGEET 540
            D+E  GSP    TYM+LL+AY+   M +EA ALV+Q++     K LS + +    L E  
Sbjct: 446  DMETAGSPCSLTTYMVLLTAYRSREMFKEADALVRQLRKAGLIKNLSVEMVAFTSLLERA 505

Query: 541  SNSA---GKSDLAVTLAQILKDKDQTVFPLVYNFNSSIFFFCKARMIEDALKAYRRMGEM 711
             NS+    KSDLA  + Q  ++ ++ V P V+  NSSI+FFCKA+M+ DALK YR+M   
Sbjct: 506  DNSSSSLSKSDLADFIIQETRE-EKEVTPTVHELNSSIYFFCKAKMMGDALKIYRKMQMK 564

Query: 712  KIQPTSQTFAYMVCGYSSLGMYREITILWGDIKRFMKNGNLVGNRDLYELLLLNFIQGGY 891
             IQPT QTFAY+V GYSSLG YR+ITILWGDIKR MKN N + +RDLYELLL+NF++GGY
Sbjct: 565  GIQPTVQTFAYLVYGYSSLGSYRDITILWGDIKRNMKNRNFLVSRDLYELLLVNFLRGGY 624

Query: 892  FERVMEVIGHMRD 930
            FERVMEV G+M++
Sbjct: 625  FERVMEVAGYMKE 637


>emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]
          Length = 444

 Score =  320 bits (821), Expect = 2e-85
 Identities = 173/315 (54%), Positives = 222/315 (70%), Gaps = 9/315 (2%)
 Frame = +1

Query: 13   RNNLQKPCFMAIGSPNLKNALKIHTEPELLQKDSVLKVESRVGLVFYTGGKLVLSNRALA 192
            RN+  K C + I S  LK  LK+   PELLQKDSV K++S+  L+ +  GK VLSN+ALA
Sbjct: 79   RNDPHKTCLVPIESYYLKEGLKLQIVPELLQKDSVFKMDSKQELLLFRNGKYVLSNKALA 138

Query: 193  KFISGYKKDGRTSELSKLLLSIQEGLYSVAGSSLCSAAIGACIQMGWLVSAHDILDDVEA 372
            K I  YK+DGR  ELS+L+LS+Q+ L ++ G  L S  I ACIQ+GWL +AHDILDD+E 
Sbjct: 139  KLIIAYKRDGRIGELSRLMLSLQKELGTLEGG-LISDVIDACIQLGWLETAHDILDDMEL 197

Query: 373  TGSPMGWDTYMLLLSAYQKGGMQREAKALVKQMKMIYSDKELSHD---------AIDKHI 525
             G+P    TYM LL+AY KG M REAKAL+KQM+      +LS +          +DK+ 
Sbjct: 198  AGAPASSITYMSLLTAYYKGKMVREAKALLKQMRKAGLIVDLSDEMVMTTCLSGVVDKNR 257

Query: 526  LGEETSNSAGKSDLAVTLAQILKDKDQTVFPLVYNFNSSIFFFCKARMIEDALKAYRRMG 705
            +   TS S  KS LA +L + +K +++ + P+VY FNSSI+FFCKA+MI+DAL+ Y RM 
Sbjct: 258  MHTRTSTSIWKSGLAESLVREMKKQEKAILPVVYKFNSSIYFFCKAKMIDDALRIYGRMQ 317

Query: 706  EMKIQPTSQTFAYMVCGYSSLGMYREITILWGDIKRFMKNGNLVGNRDLYELLLLNFIQG 885
            EMKI+PT QTF  +V GYS L MYREITILWGDIK   K+G+LV  RDLYE L+LNF++G
Sbjct: 318  EMKIEPTVQTFINLVYGYSCLNMYREITILWGDIKSSRKSGSLVVCRDLYEFLVLNFLRG 377

Query: 886  GYFERVMEVIGHMRD 930
            GYFERVMEVIG M++
Sbjct: 378  GYFERVMEVIGCMKE 392


>ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|222870305|gb|EEF07436.1|
            predicted protein [Populus trichocarpa]
          Length = 701

 Score =  313 bits (802), Expect = 4e-83
 Identities = 161/313 (51%), Positives = 226/313 (72%), Gaps = 3/313 (0%)
 Frame = +1

Query: 1    NKEYRNNLQKPCFMAIGSPNLKNALKIHTEPELLQKDSVLKVESRVGLVFYTGGKLVLSN 180
            NK+ R + +K   + IGS NLK  LKI   PELLQKDS+L V+ +  LV +  GKL+LSN
Sbjct: 337  NKKLRMDQEKRLLVPIGSNNLKTGLKIQVMPELLQKDSILTVKHKQELVMFRSGKLLLSN 396

Query: 181  RALAKFISGYKKDGRTSELSKLLLSIQEGLYSVAGSSLCSAAIGACIQMGWLVSAHDILD 360
            RALAK ++GY++ GRT++LSKLLL +Q+  + +  SS CS  I ACI++GWL  AHDILD
Sbjct: 397  RALAKLVNGYRRHGRTTDLSKLLLCMQQDFHVLGQSSFCSDVIDACIRLGWLEMAHDILD 456

Query: 361  DVEATGSPMGWDTYMLLLSAYQKGGMQREAKALVKQMKMIYSDKELSHDAIDKHILGEET 540
            D++A G+P+G   +M LL+AY    M +EAKAL+++M+       LS + +    L E  
Sbjct: 457  DMDAAGAPIGSTLHMALLTAYYCREMFKEAKALLRKMRKAGFVVNLSDEMVATACLSEAA 516

Query: 541  SN---SAGKSDLAVTLAQILKDKDQTVFPLVYNFNSSIFFFCKARMIEDALKAYRRMGEM 711
            +N   S+ KSDL   L + ++++++ +  + Y  NSSI++FCKA+M+EDALK Y+RM  M
Sbjct: 517  NNASSSSSKSDLIDFLIREMREEEKAIPSVGYELNSSIYYFCKAKMMEDALKTYKRMQHM 576

Query: 712  KIQPTSQTFAYMVCGYSSLGMYREITILWGDIKRFMKNGNLVGNRDLYELLLLNFIQGGY 891
            KIQPT QTF+Y++ G+SSLGMYR+ITILWGDIKR + + +L  +RDLYE+L LNF++GGY
Sbjct: 577  KIQPTVQTFSYLIDGFSSLGMYRDITILWGDIKRNVGSKDLEVSRDLYEVLHLNFLRGGY 636

Query: 892  FERVMEVIGHMRD 930
            FER MEVIG+M++
Sbjct: 637  FERAMEVIGYMKE 649


>ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g17616-like, partial [Vitis vinifera]
          Length = 457

 Score =  303 bits (775), Expect = 5e-80
 Identities = 160/306 (52%), Positives = 208/306 (67%)
 Frame = +1

Query: 13  RNNLQKPCFMAIGSPNLKNALKIHTEPELLQKDSVLKVESRVGLVFYTGGKLVLSNRALA 192
           RN   K C   IGS +L+  LKI   PELLQKDSV K++S+  LV ++ GK VLSN+AL 
Sbjct: 121 RNESYKTCLGPIGSYHLREGLKIQIVPELLQKDSVFKMDSKQELVLFSNGKYVLSNKALV 180

Query: 193 KFISGYKKDGRTSELSKLLLSIQEGLYSVAGSSLCSAAIGACIQMGWLVSAHDILDDVEA 372
           K +  Y+ DGR  ELS+L+LS+Q+ L ++ G  L S  I ACIQ+GWL +AH ILDD+E 
Sbjct: 181 KLVIAYQGDGRIGELSRLMLSLQKELGTLEGGGLISDVIDACIQLGWLETAHGILDDMEL 240

Query: 373 TGSPMGWDTYMLLLSAYQKGGMQREAKALVKQMKMIYSDKELSHDAIDKHILGEETSNSA 552
            G+P+G  TYM LL+AY KG M REAKAL+KQM+      +LS + +             
Sbjct: 241 AGAPIGSSTYMSLLTAYYKGKMAREAKALLKQMRKAGFVVDLSDEMV------------- 287

Query: 553 GKSDLAVTLAQILKDKDQTVFPLVYNFNSSIFFFCKARMIEDALKAYRRMGEMKIQPTSQ 732
                   +   L   ++T+ P+VY FNSSI+FFCKA+ I+DAL+ YRRM E +I+PT Q
Sbjct: 288 --------MTTCLLGVEKTILPVVYEFNSSIYFFCKAKKIDDALRIYRRMQETEIEPTVQ 339

Query: 733 TFAYMVCGYSSLGMYREITILWGDIKRFMKNGNLVGNRDLYELLLLNFIQGGYFERVMEV 912
           T   +V GYS L MYREITILWG+IKR  ++G+LV  RDLYE L+LNF++GGYFERVMEV
Sbjct: 340 TSINLVYGYSCLNMYREITILWGNIKRSRESGSLVVCRDLYEFLVLNFLRGGYFERVMEV 399

Query: 913 IGHMRD 930
           IGHM++
Sbjct: 400 IGHMKE 405