BLASTX nr result

ID: Glycyrrhiza24_contig00030101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030101
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590732.1| 4-coumarate-coa ligase [Medicago truncatula]...   146   1e-33
ref|XP_003553866.1| PREDICTED: 4-coumarate--CoA ligase-like 9-li...   129   2e-28
ref|XP_002327954.1| 4-coumarate-coa ligase [Populus trichocarpa]...   122   2e-26
ref|XP_002336775.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_003524626.1| PREDICTED: 4-coumarate--CoA ligase-like 9-li...   120   1e-25

>ref|XP_003590732.1| 4-coumarate-coa ligase [Medicago truncatula]
           gi|355479780|gb|AES60983.1| 4-coumarate-coa ligase
           [Medicago truncatula]
          Length = 539

 Score =  146 bits (369), Expect = 1e-33
 Identities = 77/109 (70%), Positives = 87/109 (79%)
 Frame = +1

Query: 1   GTILIDSAEFDSLMNIATTPSNSLPMISEVSQSDVAAILYSSGTTGKSKGVVLTHRNLTA 180
           GTILIDS EF+SL       S   P   EVSQSDVA ILYSSGTTGKSKGV+LTHRNLTA
Sbjct: 153 GTILIDSPEFESLTTETDVSSTVSP--PEVSQSDVAVILYSSGTTGKSKGVMLTHRNLTA 210

Query: 181 TVAAYDVVRVMRERPAVCLVTVPYFHVFGFTYILRTVAMMETLVVMERF 327
           TVAAY+ VR+    PAVCL+TVP FHV+GFTY+L+ VAMMET+V+MERF
Sbjct: 211 TVAAYNAVRIPTANPAVCLLTVPCFHVYGFTYLLKGVAMMETVVMMERF 259


>ref|XP_003553866.1| PREDICTED: 4-coumarate--CoA ligase-like 9-like [Glycine max]
          Length = 541

 Score =  129 bits (324), Expect = 2e-28
 Identities = 64/110 (58%), Positives = 79/110 (71%)
 Frame = +1

Query: 4   TILIDSAEFDSLMNIATTPSNSLPMISEVSQSDVAAILYSSGTTGKSKGVVLTHRNLTAT 183
           T+L+DS EFDSL           P++S V+QSDVAAILYSSGTTG  KGVV+THRNLTA 
Sbjct: 160 TVLLDSPEFDSLTKTRIQIHPPSPLVSPVTQSDVAAILYSSGTTGMMKGVVMTHRNLTAL 219

Query: 184 VAAYDVVRVMRERPAVCLVTVPYFHVFGFTYILRTVAMMETLVVMERFGI 333
            A YD VRV R+ PAV   T+P+FHV+GFT   R + + ET+V+MERF +
Sbjct: 220 AAGYDAVRVNRKYPAVFFFTMPFFHVYGFTLSFRAMVLSETVVIMERFSL 269


>ref|XP_002327954.1| 4-coumarate-coa ligase [Populus trichocarpa]
           gi|224133074|ref|XP_002327955.1| acyl:coa ligase
           [Populus trichocarpa] gi|222837363|gb|EEE75742.1|
           4-coumarate-coa ligase [Populus trichocarpa]
           gi|222837364|gb|EEE75743.1| acyl:coa ligase [Populus
           trichocarpa]
          Length = 548

 Score =  122 bits (307), Expect = 2e-26
 Identities = 65/114 (57%), Positives = 84/114 (73%), Gaps = 3/114 (2%)
 Frame = +1

Query: 1   GTILIDSAEFDSLMNIA---TTPSNSLPMISEVSQSDVAAILYSSGTTGKSKGVVLTHRN 171
           GTILIDS EFDS++ ++   TT    L  ++ V+QSD+AAI++SSGTTGK KGV+LTHRN
Sbjct: 161 GTILIDSPEFDSIITMSPATTTARQDLEKVT-VNQSDLAAIMFSSGTTGKVKGVMLTHRN 219

Query: 172 LTATVAAYDVVRVMRERPAVCLVTVPYFHVFGFTYILRTVAMMETLVVMERFGI 333
           L A +A Y   +  R+ P V L TVPYFHVFGF Y  ++VA+ ET+VVMERF +
Sbjct: 220 LMAVIAGYYPFKQERKSPTVMLYTVPYFHVFGFFYSFKSVALSETVVVMERFDL 273


>ref|XP_002336775.1| predicted protein [Populus trichocarpa] gi|222836688|gb|EEE75081.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/114 (56%), Positives = 84/114 (73%), Gaps = 3/114 (2%)
 Frame = +1

Query: 1   GTILIDSAEFDSLMNIA---TTPSNSLPMISEVSQSDVAAILYSSGTTGKSKGVVLTHRN 171
           GTILIDS EFDS++ ++   TT    L  ++ V+QSD+AAI++SSGTTGK KGV+LTHRN
Sbjct: 161 GTILIDSPEFDSIITMSPATTTTRQDLEKVT-VNQSDLAAIMFSSGTTGKVKGVLLTHRN 219

Query: 172 LTATVAAYDVVRVMRERPAVCLVTVPYFHVFGFTYILRTVAMMETLVVMERFGI 333
           L A +A Y   +  R+ P V L TVPYFHVFGF Y  +++A+ ET+VVMERF +
Sbjct: 220 LMAVIAGYYPFKQERKSPTVLLYTVPYFHVFGFFYSFKSIALSETVVVMERFDL 273


>ref|XP_003524626.1| PREDICTED: 4-coumarate--CoA ligase-like 9-like [Glycine max]
          Length = 546

 Score =  120 bits (300), Expect = 1e-25
 Identities = 63/113 (55%), Positives = 78/113 (69%), Gaps = 3/113 (2%)
 Frame = +1

Query: 4   TILIDSAEFDSLMNIATTPS---NSLPMISEVSQSDVAAILYSSGTTGKSKGVVLTHRNL 174
           T+L+DS EFD+L             L    +V+QSDVAAILYSSGTTG  KGV+LTHRNL
Sbjct: 165 TVLLDSPEFDTLTKSQIHTKYIQEGLVSNMQVTQSDVAAILYSSGTTGTIKGVMLTHRNL 224

Query: 175 TATVAAYDVVRVMRERPAVCLVTVPYFHVFGFTYILRTVAMMETLVVMERFGI 333
           TA  A YD VR  R+ PAV L TVP+FHV+GFT+ L  + + ET+V+MERF +
Sbjct: 225 TAIAAGYDTVREKRKEPAVVLYTVPFFHVYGFTFSLGAMVLSETVVIMERFSM 277


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