BLASTX nr result

ID: Glycyrrhiza24_contig00030069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030069
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530102.1| PREDICTED: ABC transporter C family member 9...   163   1e-38
ref|XP_003521031.1| PREDICTED: ABC transporter C family member 9...   162   3e-38
ref|XP_002265346.2| PREDICTED: ABC transporter C family member 9...   145   3e-33
ref|XP_002534705.1| multidrug resistance-associated protein 2, 6...   137   9e-31
ref|XP_002321253.1| multidrug resistance protein ABC transporter...   137   9e-31

>ref|XP_003530102.1| PREDICTED: ABC transporter C family member 9-like [Glycine max]
          Length = 1519

 Score =  163 bits (413), Expect = 1e-38
 Identities = 82/108 (75%), Positives = 88/108 (81%)
 Frame = +3

Query: 3   FRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLQEEEIQHDVIEYVAKDKTEFDIAIEKGR 182
           FRMLQDPIFSLPDLLN IAQGKVSVDRIASFL+EEEIQHDVIE VAKDKTEFDI IEKGR
Sbjct: 578 FRMLQDPIFSLPDLLNAIAQGKVSVDRIASFLREEEIQHDVIENVAKDKTEFDIVIEKGR 637

Query: 183 FSWDPDSTSPTIDDIELKIKRGMKVAICXXXXXXXXXXXXXXXXEIYK 326
           FSWDP+S +PTID+IELK+KRGMKVA+C                EIYK
Sbjct: 638 FSWDPESKTPTIDEIELKVKRGMKVAVCGSVGSGKSSLLSGLLGEIYK 685


>ref|XP_003521031.1| PREDICTED: ABC transporter C family member 9-like [Glycine max]
          Length = 1520

 Score =  162 bits (409), Expect = 3e-38
 Identities = 81/108 (75%), Positives = 88/108 (81%)
 Frame = +3

Query: 3   FRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLQEEEIQHDVIEYVAKDKTEFDIAIEKGR 182
           FRMLQDPIFSLPDLLNVIAQGKVSVDRIASFL+EEEIQHDVIE VAKDKTEFDI I+KGR
Sbjct: 579 FRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLREEEIQHDVIENVAKDKTEFDIVIQKGR 638

Query: 183 FSWDPDSTSPTIDDIELKIKRGMKVAICXXXXXXXXXXXXXXXXEIYK 326
           FSWDP+S +PTID+IEL +KRGMKVA+C                EIYK
Sbjct: 639 FSWDPESKTPTIDEIELNVKRGMKVAVCGSVGSGKSSLLSGILGEIYK 686


>ref|XP_002265346.2| PREDICTED: ABC transporter C family member 9-like [Vitis vinifera]
          Length = 1484

 Score =  145 bits (366), Expect = 3e-33
 Identities = 66/88 (75%), Positives = 82/88 (93%)
 Frame = +3

Query: 3   FRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLQEEEIQHDVIEYVAKDKTEFDIAIEKGR 182
           FRMLQDPIF+LPDLL+VIAQGKVSVDR+ASFLQE+E+Q D IE+V KD+TEF++ I+ G+
Sbjct: 567 FRMLQDPIFNLPDLLSVIAQGKVSVDRVASFLQEDEVQSDTIEFVPKDQTEFEVEIDNGK 626

Query: 183 FSWDPDSTSPTIDDIELKIKRGMKVAIC 266
           FSW+PDS+SPT+D I+LK+KRGMKVAIC
Sbjct: 627 FSWNPDSSSPTLDKIQLKVKRGMKVAIC 654


>ref|XP_002534705.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223524727|gb|EEF27679.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1239

 Score =  137 bits (345), Expect = 9e-31
 Identities = 63/88 (71%), Positives = 78/88 (88%)
 Frame = +3

Query: 3   FRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLQEEEIQHDVIEYVAKDKTEFDIAIEKGR 182
           FRMLQDPIF+LPDLL+VIAQGKVS DR+AS+LQE EI HD  EY+ KD+TEF++ I+ G+
Sbjct: 550 FRMLQDPIFNLPDLLSVIAQGKVSADRVASYLQEGEIPHDSTEYLPKDQTEFEVEIDGGK 609

Query: 183 FSWDPDSTSPTIDDIELKIKRGMKVAIC 266
           FSWDP+S+ PT+D I+LK+KRGMKVAIC
Sbjct: 610 FSWDPESSVPTLDGIKLKVKRGMKVAIC 637


>ref|XP_002321253.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222862026|gb|EEE99568.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1476

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/88 (72%), Positives = 77/88 (87%)
 Frame = +3

Query: 3   FRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLQEEEIQHDVIEYVAKDKTEFDIAIEKGR 182
           FRMLQDPIF+LPDLL+VIAQGKVS DR+ASFLQE EIQHD  E+V KD+ E+ I+I+ GR
Sbjct: 559 FRMLQDPIFNLPDLLSVIAQGKVSADRVASFLQEGEIQHDATEHVPKDQAEYAISIDDGR 618

Query: 183 FSWDPDSTSPTIDDIELKIKRGMKVAIC 266
           F WD DS++PT+D+I LK+KRGMKVAIC
Sbjct: 619 FCWDSDSSNPTLDEIRLKVKRGMKVAIC 646


Top