BLASTX nr result

ID: Glycyrrhiza24_contig00030063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030063
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-l...   132   2e-29
ref|XP_003552397.1| PREDICTED: putative ABC1 protein At2g40090-l...   120   1e-25
ref|XP_003600881.1| ABC transporter like protein [Medicago trunc...   113   2e-23
ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|22352...   108   4e-22
ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21

>ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-like [Glycine max]
          Length = 541

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/95 (70%), Positives = 69/95 (72%)
 Frame = +1

Query: 52  MASLWRAGAKXXXXXXXXXXXXXXXXXXXXDDPETALKLCTTVPRRLFRDAVTAANIAFD 231
           MA LWRAGAK                    DDPETALKLC TVP RLFRDA TAANIAFD
Sbjct: 1   MAWLWRAGAKLSLVASAVGGGATAALIATSDDPETALKLCATVPHRLFRDAATAANIAFD 60

Query: 232 YEYSLWGLPEGSNERERIKHEVHFRSAQKLRDLCF 336
           YEYSLWGL EGS+ERERIKHEVH RSAQKL+DLCF
Sbjct: 61  YEYSLWGLLEGSSERERIKHEVHLRSAQKLQDLCF 95


>ref|XP_003552397.1| PREDICTED: putative ABC1 protein At2g40090-like [Glycine max]
          Length = 541

 Score =  120 bits (301), Expect = 1e-25
 Identities = 63/95 (66%), Positives = 65/95 (68%)
 Frame = +1

Query: 52  MASLWRAGAKXXXXXXXXXXXXXXXXXXXXDDPETALKLCTTVPRRLFRDAVTAANIAFD 231
           MA LWRAGAK                    DDPE ALKL  TVP RLFR A TAANIAFD
Sbjct: 1   MAWLWRAGAKLSLVASAVGGGATAALIATSDDPEMALKLFATVPHRLFRGAATAANIAFD 60

Query: 232 YEYSLWGLPEGSNERERIKHEVHFRSAQKLRDLCF 336
           YEYSL G PEGS+ERERIKHEVH RSAQKL+DLCF
Sbjct: 61  YEYSLRGFPEGSSERERIKHEVHLRSAQKLQDLCF 95


>ref|XP_003600881.1| ABC transporter like protein [Medicago truncatula]
           gi|355489929|gb|AES71132.1| ABC transporter like protein
           [Medicago truncatula]
          Length = 657

 Score =  113 bits (282), Expect = 2e-23
 Identities = 61/109 (55%), Positives = 67/109 (61%), Gaps = 14/109 (12%)
 Frame = +1

Query: 52  MASLWRAGAKXXXXXXXXXXXXXXXXXXXXDDPETALKLCTTVPRRLFRDAVTAANIAF- 228
           MASLWRAG K                    DDP TALKL TT+PRRLF DAVTAANI F 
Sbjct: 1   MASLWRAGTKLSLLATAIGGGSAAALIATSDDPATALKLSTTIPRRLFDDAVTAANIVFV 60

Query: 229 -------------DYEYSLWGLPEGSNERERIKHEVHFRSAQKLRDLCF 336
                        DYEYSL G+PEGS ERE++KHEVH RSA++LRDLCF
Sbjct: 61  MCYCYVALTLLIEDYEYSLHGIPEGSIEREKVKHEVHLRSAERLRDLCF 109


>ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|223526458|gb|EEF28733.1|
           ATATH9, putative [Ricinus communis]
          Length = 549

 Score =  108 bits (270), Expect = 4e-22
 Identities = 55/93 (59%), Positives = 62/93 (66%)
 Frame = +1

Query: 58  SLWRAGAKXXXXXXXXXXXXXXXXXXXXDDPETALKLCTTVPRRLFRDAVTAANIAFDYE 237
           SLWR   K                    DDP  ALKLCTTVP RL RDA+TAA+IAFDYE
Sbjct: 5   SLWRTRTKLAVAATAILTGGAAATVATSDDPAMALKLCTTVPVRLARDAITAASIAFDYE 64

Query: 238 YSLWGLPEGSNERERIKHEVHFRSAQKLRDLCF 336
           YSL GLPEGS ER ++KHEVH RSA+KL++LCF
Sbjct: 65  YSLLGLPEGSAERSKMKHEVHLRSARKLQELCF 97


>ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|222851038|gb|EEE88585.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/93 (55%), Positives = 62/93 (66%)
 Frame = +1

Query: 58  SLWRAGAKXXXXXXXXXXXXXXXXXXXXDDPETALKLCTTVPRRLFRDAVTAANIAFDYE 237
           SLWR   K                    +DP TALKLCT VP RL+R+ VTAA+IAFDYE
Sbjct: 5   SLWRTRGKLAVAATALLTGGATATVATSEDPATALKLCTAVPVRLYRNTVTAASIAFDYE 64

Query: 238 YSLWGLPEGSNERERIKHEVHFRSAQKLRDLCF 336
           YSLWGL EGS E+ ++KHEVH RSA+KL++LCF
Sbjct: 65  YSLWGLSEGSVEKAKVKHEVHLRSARKLQELCF 97


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