BLASTX nr result

ID: Glycyrrhiza24_contig00030031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030031
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540216.1| PREDICTED: putative SWI/SNF-related matrix-a...   119   3e-25
ref|XP_003551078.1| PREDICTED: putative SWI/SNF-related matrix-a...   117   1e-24
ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-a...    81   1e-13
emb|CBI17093.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-a...    81   1e-13

>ref|XP_003540216.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Glycine max]
          Length = 1008

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/77 (77%), Positives = 63/77 (81%), Gaps = 5/77 (6%)
 Frame = +2

Query: 2   KDATNSTDESVFHPLPTLFRLLGLSPFKKAELTPSDFYSNKRPFSQR-----VTLLPAKS 166
           KDA NSTDESVFHPLPTLFRLLGL+PFKKAELTP DFYSNKRP SQR     V L   KS
Sbjct: 221 KDAANSTDESVFHPLPTLFRLLGLNPFKKAELTPGDFYSNKRPLSQRVQNSTVPLPRTKS 280

Query: 167 ERPSQNGHENENEDSVS 217
           E PSQNG EN+NEDS+S
Sbjct: 281 EHPSQNGQENDNEDSIS 297


>ref|XP_003551078.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Glycine max]
          Length = 1009

 Score =  117 bits (293), Expect = 1e-24
 Identities = 59/78 (75%), Positives = 65/78 (83%), Gaps = 6/78 (7%)
 Frame = +2

Query: 2   KDATNSTDESVFHPLPTLFRLLGLSPFKKAELTPSDFYSNKRPFSQR------VTLLPAK 163
           KDA NSTDESVFHPL  LFRLLGL+PFKKAELTPSDFYSNKRP +QR      VTL  +K
Sbjct: 221 KDAANSTDESVFHPLTNLFRLLGLNPFKKAELTPSDFYSNKRPLTQRERYSLQVTLPCSK 280

Query: 164 SERPSQNGHENENEDSVS 217
           SE PSQNGHE++NEDS+S
Sbjct: 281 SEHPSQNGHESDNEDSIS 298


>ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Vitis vinifera]
          Length = 1029

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
 Frame = +2

Query: 8   ATNSTDESVFHPLPTLFRLLGLSPFKKAELTPSDFYSNKRPFSQRVT------LLPAKSE 169
           A+NS++ESV H LPTLFRLLGL+PFKKAE +P D Y+ KRP   +        L   K +
Sbjct: 243 ASNSSEESVVHALPTLFRLLGLTPFKKAEFSPDDLYTRKRPLESKDNSGIPGLLSHVKFK 302

Query: 170 RPSQNGHENENEDSVS 217
            PS NG+E ENE+S+S
Sbjct: 303 NPSPNGNEVENEESIS 318


>emb|CBI17093.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
 Frame = +2

Query: 8   ATNSTDESVFHPLPTLFRLLGLSPFKKAELTPSDFYSNKRPFSQRVT------LLPAKSE 169
           A+NS++ESV H LPTLFRLLGL+PFKKAE +P D Y+ KRP   +        L   K +
Sbjct: 239 ASNSSEESVVHALPTLFRLLGLTPFKKAEFSPDDLYTRKRPLESKDNSGIPGLLSHVKFK 298

Query: 170 RPSQNGHENENEDSVS 217
            PS NG+E ENE+S+S
Sbjct: 299 NPSPNGNEVENEESIS 314


>ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like isoform 2 [Vitis vinifera]
          Length = 1016

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
 Frame = +2

Query: 8   ATNSTDESVFHPLPTLFRLLGLSPFKKAELTPSDFYSNKRPFSQRVT------LLPAKSE 169
           A+NS++ESV H LPTLFRLLGL+PFKKAE +P D Y+ KRP   +        L   K +
Sbjct: 230 ASNSSEESVVHALPTLFRLLGLTPFKKAEFSPDDLYTRKRPLESKDNSGIPGLLSHVKFK 289

Query: 170 RPSQNGHENENEDSVS 217
            PS NG+E ENE+S+S
Sbjct: 290 NPSPNGNEVENEESIS 305


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