BLASTX nr result

ID: Glycyrrhiza24_contig00030014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030014
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783...   156   1e-36
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819...   156   1e-36
ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...   126   2e-27
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]      122   3e-26
gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold ...   120   9e-26

>ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
          Length = 2219

 Score =  156 bits (395), Expect = 1e-36
 Identities = 72/136 (52%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
 Frame = -2

Query: 407 DLMQNPTSPFYVHPNENPAASTVNKQLNSNNYHSWVRLMKKALIGKGKFRFVDGS-PKVS 231
           D   +PTSPF+VHP++ P++  V   L+ +NYHSW R +++AL  K KF F+DG+ P   
Sbjct: 205 DPSTDPTSPFFVHPSDGPSSVKVTPLLDGSNYHSWARSLRRALGAKLKFEFLDGTIPMPV 264

Query: 230 DCFDPTYDAWERCNDIVHSWIINSVSPSIVESVMYMENAFDV*KDLKDRFSQGNRVRIAE 51
           D FDP++ AW RCN ++HSWI+NSV PSI  S+++M+NA DV  DLK+RFSQG+ VR++E
Sbjct: 265 DAFDPSFRAWNRCNMLIHSWILNSVEPSISRSIVFMDNASDVWLDLKERFSQGDLVRVSE 324

Query: 50  LQHELYQLKQGALSVT 3
           +Q E+Y L QG  SVT
Sbjct: 325 IQQEIYALTQGTRSVT 340


>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
          Length = 1750

 Score =  156 bits (395), Expect = 1e-36
 Identities = 72/136 (52%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
 Frame = -2

Query: 407 DLMQNPTSPFYVHPNENPAASTVNKQLNSNNYHSWVRLMKKALIGKGKFRFVDGS-PKVS 231
           D   +PTSPF+VHP++ P++  V   L+ +NYHSW R +++AL  K KF F+DG+ P   
Sbjct: 12  DPSTDPTSPFFVHPSDGPSSVKVTPLLDGSNYHSWARSLRRALGAKLKFEFLDGTIPMPV 71

Query: 230 DCFDPTYDAWERCNDIVHSWIINSVSPSIVESVMYMENAFDV*KDLKDRFSQGNRVRIAE 51
           D FDP++ AW RCN ++HSWI+NSV PSI  S+++M+NA DV  DLK+RFSQG+ VR++E
Sbjct: 72  DAFDPSFRAWNRCNMLIHSWILNSVEPSISRSIVFMDNASDVWLDLKERFSQGDLVRVSE 131

Query: 50  LQHELYQLKQGALSVT 3
           +Q E+Y L QG  SVT
Sbjct: 132 IQQEIYALTQGTRSVT 147


>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/133 (46%), Positives = 90/133 (67%)
 Frame = -2

Query: 401 MQNPTSPFYVHPNENPAASTVNKQLNSNNYHSWVRLMKKALIGKGKFRFVDGSPKVSDCF 222
           + N  S  Y+HP+ENPA + V+  L+S NYHSW R M  AL  K K  F+DGS       
Sbjct: 353 INNMESYLYLHPSENPATALVSPVLDSTNYHSWSRSMVTALSAKNKVEFIDGSAPEPLKT 412

Query: 221 DPTYDAWERCNDIVHSWIINSVSPSIVESVMYMENAFDV*KDLKDRFSQGNRVRIAELQH 42
           D  + AW RCN++V SWI++SV+ SI +S+++M+ A ++ +DLK R+SQG+ +RI++LQ 
Sbjct: 413 DRMHGAWCRCNNMVVSWIVHSVATSIRQSILWMDKAEEIWRDLKSRYSQGDLLRISDLQQ 472

Query: 41  ELYQLKQGALSVT 3
           E   +KQG L+VT
Sbjct: 473 EASTMKQGTLTVT 485


>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/130 (43%), Positives = 85/130 (65%)
 Frame = -2

Query: 395 NPTSPFYVHPNENPAASTVNKQLNSNNYHSWVRLMKKALIGKGKFRFVDGSPKVSDCFDP 216
           N  SP+Y+HP++ P++  +  +LN +NY +W R M++AL  K K  F+DGS  V D  D 
Sbjct: 10  NSDSPYYIHPSDGPSSLIITPKLNGSNYLAWHRSMQRALGAKNKLVFLDGSISVPDIDDL 69

Query: 215 TYDAWERCNDIVHSWIINSVSPSIVESVMYMENAFDV*KDLKDRFSQGNRVRIAELQHEL 36
              AWERCN ++HSWI+NSV+ SI +++++ + A     DLK+ FS+ +RVR+  L+  +
Sbjct: 70  NRQAWERCNHLIHSWIVNSVTESIAQTIVFHDTALSAWDDLKECFSKVDRVRVLSLRSTI 129

Query: 35  YQLKQGALSV 6
             LKQG  SV
Sbjct: 130 NNLKQGTKSV 139


>gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 772

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/130 (46%), Positives = 85/130 (65%)
 Frame = -2

Query: 395 NPTSPFYVHPNENPAASTVNKQLNSNNYHSWVRLMKKALIGKGKFRFVDGSPKVSDCFDP 216
           N  S +YVHP+E P + TV   L   NY +W R MK+AL  K KF F+DGS  +    D 
Sbjct: 14  NIDSIYYVHPSEGPNSVTVTPLLTGPNYLAWNRSMKRALGTKNKFVFIDGSVPIPPMDDL 73

Query: 215 TYDAWERCNDIVHSWIINSVSPSIVESVMYMENAFDV*KDLKDRFSQGNRVRIAELQHEL 36
              AWERCN+++ SWIINSVSP I +++++ E A DV  +L++RFS+ +R+R+A L+  +
Sbjct: 74  NRTAWERCNNLILSWIINSVSPQIAQTIVFHEYAIDVWIELQERFSKVDRIRVASLRSSI 133

Query: 35  YQLKQGALSV 6
             LKQG  SV
Sbjct: 134 NNLKQGDKSV 143


Top