BLASTX nr result

ID: Glycyrrhiza24_contig00029988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029988
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538947.1| PREDICTED: uncharacterized protein LOC100800...   105   5e-21
ref|XP_003607305.1| Chromodomain helicase DNA binding protein [M...   101   6e-20
ref|XP_003540620.1| PREDICTED: uncharacterized protein LOC100791...   100   2e-19

>ref|XP_003538947.1| PREDICTED: uncharacterized protein LOC100800973 [Glycine max]
          Length = 1735

 Score =  105 bits (261), Expect = 5e-21
 Identities = 56/96 (58%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
 Frame = -1

Query: 367 CPSEAGFAIVHECQDDPGSPCNQGSSRRKRRKVSDNLETTMDTVLXXXXXXXXXXXXXXX 188
           CPSE G AI+HE QDDP SPC QG+SRRKRRKVSDN E T +TVL               
Sbjct: 368 CPSEGGVAIIHEHQDDPRSPCKQGNSRRKRRKVSDNPEVTPETVLRRSSRRASARKRVSS 427

Query: 187 XXXVQVTDGPLPSLGTS-VTEEKPLMPDTEKYEQCN 83
              V+VTD PL SL TS +TEEKPL+P ++KYEQC+
Sbjct: 428 TVLVEVTDDPLLSLETSALTEEKPLIPGSQKYEQCS 463


>ref|XP_003607305.1| Chromodomain helicase DNA binding protein [Medicago truncatula]
           gi|355508360|gb|AES89502.1| Chromodomain helicase DNA
           binding protein [Medicago truncatula]
          Length = 1573

 Score =  101 bits (252), Expect = 6e-20
 Identities = 54/93 (58%), Positives = 61/93 (65%)
 Frame = -1

Query: 358 EAGFAIVHECQDDPGSPCNQGSSRRKRRKVSDNLETTMDTVLXXXXXXXXXXXXXXXXXX 179
           E G A+V+ECQDDPGSPC Q SS+RKRRKVS+N + T +T L                  
Sbjct: 497 ETGVAVVNECQDDPGSPCKQESSQRKRRKVSNNSKATPETAL------RRSSRRVSARKQ 550

Query: 178 VQVTDGPLPSLGTSVTEEKPLMPDTEKYEQCNV 80
            QVTD PL SL TSVTEEKP MP +EKYEQCNV
Sbjct: 551 AQVTDDPLSSLETSVTEEKPSMPGSEKYEQCNV 583


>ref|XP_003540620.1| PREDICTED: uncharacterized protein LOC100791832 [Glycine max]
          Length = 1702

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 52/98 (53%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
 Frame = -1

Query: 373 MDCPSEAGFAIVHECQDDPGSPCNQGSSRRKRRKVSDNLETTMDTVLXXXXXXXXXXXXX 194
           +D PSE G A++HE QDDPGSPC QG+ RRKRRKVSDN + T +TVL             
Sbjct: 364 VDWPSEGGVAVIHELQDDPGSPCKQGNGRRKRRKVSDNPQATPETVLRRSSRRASARKRV 423

Query: 193 XXXXXVQVTDGPLPSLGTS-VTEEKPLMPDTEKYEQCN 83
                V+VTD PL SL TS +T EKPL+ +++KYEQC+
Sbjct: 424 SSTILVEVTDDPLMSLETSALTGEKPLISNSQKYEQCS 461


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