BLASTX nr result
ID: Glycyrrhiza24_contig00029988
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00029988 (373 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003538947.1| PREDICTED: uncharacterized protein LOC100800... 105 5e-21 ref|XP_003607305.1| Chromodomain helicase DNA binding protein [M... 101 6e-20 ref|XP_003540620.1| PREDICTED: uncharacterized protein LOC100791... 100 2e-19 >ref|XP_003538947.1| PREDICTED: uncharacterized protein LOC100800973 [Glycine max] Length = 1735 Score = 105 bits (261), Expect = 5e-21 Identities = 56/96 (58%), Positives = 65/96 (67%), Gaps = 1/96 (1%) Frame = -1 Query: 367 CPSEAGFAIVHECQDDPGSPCNQGSSRRKRRKVSDNLETTMDTVLXXXXXXXXXXXXXXX 188 CPSE G AI+HE QDDP SPC QG+SRRKRRKVSDN E T +TVL Sbjct: 368 CPSEGGVAIIHEHQDDPRSPCKQGNSRRKRRKVSDNPEVTPETVLRRSSRRASARKRVSS 427 Query: 187 XXXVQVTDGPLPSLGTS-VTEEKPLMPDTEKYEQCN 83 V+VTD PL SL TS +TEEKPL+P ++KYEQC+ Sbjct: 428 TVLVEVTDDPLLSLETSALTEEKPLIPGSQKYEQCS 463 >ref|XP_003607305.1| Chromodomain helicase DNA binding protein [Medicago truncatula] gi|355508360|gb|AES89502.1| Chromodomain helicase DNA binding protein [Medicago truncatula] Length = 1573 Score = 101 bits (252), Expect = 6e-20 Identities = 54/93 (58%), Positives = 61/93 (65%) Frame = -1 Query: 358 EAGFAIVHECQDDPGSPCNQGSSRRKRRKVSDNLETTMDTVLXXXXXXXXXXXXXXXXXX 179 E G A+V+ECQDDPGSPC Q SS+RKRRKVS+N + T +T L Sbjct: 497 ETGVAVVNECQDDPGSPCKQESSQRKRRKVSNNSKATPETAL------RRSSRRVSARKQ 550 Query: 178 VQVTDGPLPSLGTSVTEEKPLMPDTEKYEQCNV 80 QVTD PL SL TSVTEEKP MP +EKYEQCNV Sbjct: 551 AQVTDDPLSSLETSVTEEKPSMPGSEKYEQCNV 583 >ref|XP_003540620.1| PREDICTED: uncharacterized protein LOC100791832 [Glycine max] Length = 1702 Score = 99.8 bits (247), Expect = 2e-19 Identities = 52/98 (53%), Positives = 65/98 (66%), Gaps = 1/98 (1%) Frame = -1 Query: 373 MDCPSEAGFAIVHECQDDPGSPCNQGSSRRKRRKVSDNLETTMDTVLXXXXXXXXXXXXX 194 +D PSE G A++HE QDDPGSPC QG+ RRKRRKVSDN + T +TVL Sbjct: 364 VDWPSEGGVAVIHELQDDPGSPCKQGNGRRKRRKVSDNPQATPETVLRRSSRRASARKRV 423 Query: 193 XXXXXVQVTDGPLPSLGTS-VTEEKPLMPDTEKYEQCN 83 V+VTD PL SL TS +T EKPL+ +++KYEQC+ Sbjct: 424 SSTILVEVTDDPLMSLETSALTGEKPLISNSQKYEQCS 461