BLASTX nr result

ID: Glycyrrhiza24_contig00029986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029986
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup2...    92   4e-17
ref|XP_003625502.1| Nuclear pore complex protein Nup205 [Medicag...    81   8e-14
ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup2...    74   2e-11
emb|CBI28192.3| unnamed protein product [Vitis vinifera]               70   2e-10

>ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup205-like [Glycine max]
          Length = 1931

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/55 (80%), Positives = 50/55 (90%)
 Frame = +2

Query: 107 KIKES*DKVMSVLSPYPVVGSHDFAQDRSSNSLHGTETGPSPFNSILDFVSKIYQ 271
           KIKES +++MSVLSPY VVGSHDFAQD +S+SLHGTE GP PFNSILDFVS+IYQ
Sbjct: 405 KIKESKERIMSVLSPYRVVGSHDFAQDSNSSSLHGTEMGPLPFNSILDFVSEIYQ 459


>ref|XP_003625502.1| Nuclear pore complex protein Nup205 [Medicago truncatula]
           gi|355500517|gb|AES81720.1| Nuclear pore complex protein
           Nup205 [Medicago truncatula]
          Length = 2047

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/54 (77%), Positives = 45/54 (83%)
 Frame = +2

Query: 107 KIKES*DKVMSVLSPYPVVGSHDFAQDRSSNSLHGTETGPSPFNSILDFVSKIY 268
           KIKES +KVMSVLSPY VVGSHDFAQ+ SS S  GTE G  PFNSILDFVS+IY
Sbjct: 510 KIKESKEKVMSVLSPYRVVGSHDFAQNSSSVSQQGTEAGSLPFNSILDFVSEIY 563


>ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup205-like [Vitis
           vinifera]
          Length = 1934

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/66 (51%), Positives = 45/66 (68%)
 Frame = +2

Query: 86  WCQQIPIKIKES*DKVMSVLSPYPVVGSHDFAQDRSSNSLHGTETGPSPFNSILDFVSKI 265
           W   +P ++KE+ +K MSVLSPY +VGSHDF  D +SNS    E G  PF S+L+FVS++
Sbjct: 462 WNSLVPPRVKETKEKAMSVLSPYRMVGSHDFMHDNNSNSQKAVEMGSQPFVSLLEFVSEV 521

Query: 266 YQATNE 283
           YQ   E
Sbjct: 522 YQKEPE 527


>emb|CBI28192.3| unnamed protein product [Vitis vinifera]
          Length = 1889

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/59 (55%), Positives = 42/59 (71%)
 Frame = +2

Query: 107 KIKES*DKVMSVLSPYPVVGSHDFAQDRSSNSLHGTETGPSPFNSILDFVSKIYQATNE 283
           K+KE+ +K MSVLSPY +VGSHDF  D +SNS    E G  PF S+L+FVS++YQ   E
Sbjct: 405 KVKETKEKAMSVLSPYRMVGSHDFMHDNNSNSQKAVEMGSQPFVSLLEFVSEVYQKEPE 463


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