BLASTX nr result

ID: Glycyrrhiza24_contig00029984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029984
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525640.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    87   1e-15
ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    86   2e-15
ref|XP_003609133.1| ATP-dependent RNA helicase has1 [Medicago tr...    80   2e-13
ref|XP_003609131.1| DEAD-box ATP-dependent RNA helicase [Medicag...    80   2e-13
ref|XP_004169180.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    77   2e-12

>ref|XP_003525640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
           max]
          Length = 572

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/65 (67%), Positives = 48/65 (73%)
 Frame = -2

Query: 445 NVHRLDLQAVAASFCFLXXXXXXXXXXXSKQRKKMRKVDGSRHGFSQSNPYGKGLAEDKR 266
           NVHRLDLQAVA+SF F            SKQR KMRKVDGSRHGF+ +NPYGK  A+DKR
Sbjct: 508 NVHRLDLQAVASSFSFSNPPNVSLNINSSKQRNKMRKVDGSRHGFNDNNPYGKKNADDKR 567

Query: 265 QFVRH 251
           QFVRH
Sbjct: 568 QFVRH 572


>ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
           max]
          Length = 575

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/65 (66%), Positives = 47/65 (72%)
 Frame = -2

Query: 445 NVHRLDLQAVAASFCFLXXXXXXXXXXXSKQRKKMRKVDGSRHGFSQSNPYGKGLAEDKR 266
           N+H LDLQAVA+SFCF            SKQR KMRKVDGSRHGFS  NPYGK  A+DKR
Sbjct: 511 NIHHLDLQAVASSFCFSNPPNVSLNINSSKQRNKMRKVDGSRHGFSGDNPYGKRNADDKR 570

Query: 265 QFVRH 251
           QFVR+
Sbjct: 571 QFVRY 575


>ref|XP_003609133.1| ATP-dependent RNA helicase has1 [Medicago truncatula]
           gi|355510188|gb|AES91330.1| ATP-dependent RNA helicase
           has1 [Medicago truncatula]
          Length = 624

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/76 (56%), Positives = 51/76 (67%)
 Frame = -2

Query: 445 NVHRLDLQAVAASFCFLXXXXXXXXXXXSKQRKKMRKVDGSRHGFSQSNPYGKGLAEDKR 266
           +V RLD+QAVAASFCF            SKQRKK R+VDGSRHGF+ +NPYGK  A+DKR
Sbjct: 519 SVQRLDMQAVAASFCFSNPPNVSLNINMSKQRKKTRRVDGSRHGFNPNNPYGKRNADDKR 578

Query: 265 QFVRH*QQ*TCHGFIE 218
           QFV      +CH  +E
Sbjct: 579 QFV------SCHPPLE 588


>ref|XP_003609131.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355510186|gb|AES91328.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 448

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/76 (56%), Positives = 51/76 (67%)
 Frame = -2

Query: 445 NVHRLDLQAVAASFCFLXXXXXXXXXXXSKQRKKMRKVDGSRHGFSQSNPYGKGLAEDKR 266
           +V RLD+QAVAASFCF            SKQRKK R+VDGSRHGF+ +NPYGK  A+DKR
Sbjct: 343 SVQRLDMQAVAASFCFSNPPNVSLNINMSKQRKKTRRVDGSRHGFNPNNPYGKRNADDKR 402

Query: 265 QFVRH*QQ*TCHGFIE 218
           QFV      +CH  +E
Sbjct: 403 QFV------SCHPPLE 412


>ref|XP_004169180.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Cucumis
           sativus]
          Length = 579

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
 Frame = -2

Query: 445 NVHRLDLQAVAASFCFLXXXXXXXXXXXS--KQRKKMRKVDGSRHGFSQSNPYGKGLAED 272
           NVHRLDLQA+AASFCF            S  K RKK RKV+GSR+ FS+SNPYGK  AED
Sbjct: 513 NVHRLDLQAIAASFCFSNPPKVNLNIDSSASKLRKKTRKVEGSRNRFSESNPYGKKNAED 572

Query: 271 KRQFVRH 251
           +RQFVR+
Sbjct: 573 ERQFVRY 579


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