BLASTX nr result

ID: Glycyrrhiza24_contig00029982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029982
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600546.1| DNA primase small subunit [Medicago truncatu...   145   4e-33
gb|AFK46602.1| unknown [Medicago truncatula]                          143   1e-32
gb|AFK38123.1| unknown [Lotus japonicus]                              142   4e-32
ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [V...   141   6e-32
emb|CBI34473.3| unnamed protein product [Vitis vinifera]              141   6e-32

>ref|XP_003600546.1| DNA primase small subunit [Medicago truncatula]
           gi|355489594|gb|AES70797.1| DNA primase small subunit
           [Medicago truncatula]
          Length = 433

 Score =  145 bits (365), Expect = 4e-33
 Identities = 63/65 (96%), Positives = 63/65 (96%)
 Frame = -2

Query: 516 LIFDIDMTDYDDVRYCCSGAGVCLDCWPLMTIAIKVIDTSLRDDFGFKHILWVYSGRRGV 337
           LIFDIDMTDYDDVRYCC GA VCLDCWPLMTIAIKVIDTSLRDDFGFKHILWVYSGRRGV
Sbjct: 116 LIFDIDMTDYDDVRYCCKGADVCLDCWPLMTIAIKVIDTSLRDDFGFKHILWVYSGRRGV 175

Query: 336 HCWVC 322
           HCWVC
Sbjct: 176 HCWVC 180



 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/62 (91%), Positives = 60/62 (96%)
 Frame = -3

Query: 188 IADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKDFFEKKLLTSQNILATEERYEK 9
           +ADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKD+FEK LLT QN+LATEERYEK
Sbjct: 195 VADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKDYFEKVLLTRQNLLATEERYEK 254

Query: 8   IL 3
           IL
Sbjct: 255 IL 256


>gb|AFK46602.1| unknown [Medicago truncatula]
          Length = 433

 Score =  143 bits (361), Expect = 1e-32
 Identities = 62/65 (95%), Positives = 62/65 (95%)
 Frame = -2

Query: 516 LIFDIDMTDYDDVRYCCSGAGVCLDCWPLMTIAIKVIDTSLRDDFGFKHILWVYSGRRGV 337
           LIFDIDMTDYDDVRYCC GA VCLDCWPLMTI IKVIDTSLRDDFGFKHILWVYSGRRGV
Sbjct: 116 LIFDIDMTDYDDVRYCCKGADVCLDCWPLMTIVIKVIDTSLRDDFGFKHILWVYSGRRGV 175

Query: 336 HCWVC 322
           HCWVC
Sbjct: 176 HCWVC 180



 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/62 (91%), Positives = 60/62 (96%)
 Frame = -3

Query: 188 IADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKDFFEKKLLTSQNILATEERYEK 9
           +ADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKD+FEK LLT QN+LATEERYEK
Sbjct: 195 VADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKDYFEKVLLTRQNLLATEERYEK 254

Query: 8   IL 3
           IL
Sbjct: 255 IL 256


>gb|AFK38123.1| unknown [Lotus japonicus]
          Length = 347

 Score =  142 bits (357), Expect = 4e-32
 Identities = 61/65 (93%), Positives = 64/65 (98%)
 Frame = -2

Query: 516 LIFDIDMTDYDDVRYCCSGAGVCLDCWPLMTIAIKVIDTSLRDDFGFKHILWVYSGRRGV 337
           LIFDIDM+DYDDVRYCCSGA VCL+CWPLMTIAIKVIDT+LRDDFGFKHILWVYSGRRGV
Sbjct: 141 LIFDIDMSDYDDVRYCCSGADVCLNCWPLMTIAIKVIDTALRDDFGFKHILWVYSGRRGV 200

Query: 336 HCWVC 322
           HCWVC
Sbjct: 201 HCWVC 205



 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/62 (88%), Positives = 59/62 (95%)
 Frame = -3

Query: 188 IADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKDFFEKKLLTSQNILATEERYEK 9
           IADYFRVYKGNEN+HKK+SL GAALHPFLATSYT+VLK FFEK LLTSQN+LATEERYEK
Sbjct: 220 IADYFRVYKGNENTHKKISLTGAALHPFLATSYTSVLKHFFEKNLLTSQNLLATEERYEK 279

Query: 8   IL 3
           IL
Sbjct: 280 IL 281


>ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [Vitis vinifera]
          Length = 457

 Score =  141 bits (355), Expect = 6e-32
 Identities = 59/65 (90%), Positives = 63/65 (96%)
 Frame = -2

Query: 516 LIFDIDMTDYDDVRYCCSGAGVCLDCWPLMTIAIKVIDTSLRDDFGFKHILWVYSGRRGV 337
           L+FDID+TDYDDVRYCCSGA VCLDCWPLMT+AIKVIDT+LRDDFGF HILWVYSGRRGV
Sbjct: 140 LVFDIDITDYDDVRYCCSGADVCLDCWPLMTVAIKVIDTALRDDFGFNHILWVYSGRRGV 199

Query: 336 HCWVC 322
           HCWVC
Sbjct: 200 HCWVC 204



 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/62 (80%), Positives = 54/62 (87%)
 Frame = -3

Query: 188 IADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKDFFEKKLLTSQNILATEERYEK 9
           IADYFRVYKGNENS KKVSL+G ALHPFLA SYT VLKDFFE+KLL  Q + +TEERYEK
Sbjct: 219 IADYFRVYKGNENSQKKVSLVGPALHPFLARSYTEVLKDFFEEKLLPGQKLFSTEERYEK 278

Query: 8   IL 3
           IL
Sbjct: 279 IL 280


>emb|CBI34473.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score =  141 bits (355), Expect = 6e-32
 Identities = 59/65 (90%), Positives = 63/65 (96%)
 Frame = -2

Query: 516 LIFDIDMTDYDDVRYCCSGAGVCLDCWPLMTIAIKVIDTSLRDDFGFKHILWVYSGRRGV 337
           L+FDID+TDYDDVRYCCSGA VCLDCWPLMT+AIKVIDT+LRDDFGF HILWVYSGRRGV
Sbjct: 130 LVFDIDITDYDDVRYCCSGADVCLDCWPLMTVAIKVIDTALRDDFGFNHILWVYSGRRGV 189

Query: 336 HCWVC 322
           HCWVC
Sbjct: 190 HCWVC 194



 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/62 (80%), Positives = 54/62 (87%)
 Frame = -3

Query: 188 IADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKDFFEKKLLTSQNILATEERYEK 9
           IADYFRVYKGNENS KKVSL+G ALHPFLA SYT VLKDFFE+KLL  Q + +TEERYEK
Sbjct: 209 IADYFRVYKGNENSQKKVSLVGPALHPFLARSYTEVLKDFFEEKLLPGQKLFSTEERYEK 268

Query: 8   IL 3
           IL
Sbjct: 269 IL 270


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