BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029977
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago t...   243   1e-62
ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago t...   243   2e-62
ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containi...   209   1e-52
gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]        156   2e-36
gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japo...   153   2e-35

>ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355492766|gb|AES73969.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 629

 Score =  243 bits (620), Expect = 1e-62
 Identities = 121/165 (73%), Positives = 137/165 (83%), Gaps = 3/165 (1%)
 Frame = +3

Query: 3   GIELFRDLKRSF---ARVRPNGPLLVSVLSACTAVGAFEEGKGIHSYVXXXXXXXXXXXX 173
           G++LFR+LK+     ARV+ NG LLVSVL+ACT +GAFEEGK IHSYV            
Sbjct: 237 GVQLFRELKKKDKGRARVKFNGALLVSVLNACTVMGAFEEGKWIHSYVEENGLEYDLELG 296

Query: 174 TALIDFYAKCGWVRGAEQVFDRMPVKDVATWSAMILGLAINGNNHMALELFEEMEKIGPK 353
           TALIDFYAKCGWV+ AE+VFD+M VKDVATWSAMILGLAINGNN MALELFE+MEK+GPK
Sbjct: 297 TALIDFYAKCGWVKDAEKVFDKMLVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPK 356

Query: 354 PNAVTFVGVLTACNHKNLLGEAWRLFGLMSEKYGITPSIEHYGCM 488
           PN VTFVGVLTACNHK+L GE+ RLFG+MSEKY ITPSIEHYGC+
Sbjct: 357 PNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNITPSIEHYGCI 401


>ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355523910|gb|AET04364.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 515

 Score =  243 bits (619), Expect = 2e-62
 Identities = 120/165 (72%), Positives = 137/165 (83%), Gaps = 3/165 (1%)
 Frame = +3

Query: 3   GIELFRDLKRS---FARVRPNGPLLVSVLSACTAVGAFEEGKGIHSYVXXXXXXXXXXXX 173
           G++LFR+LK+     A ++ NG LLVSVL+ACT VGAFEEGK IHSYV            
Sbjct: 201 GVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGKWIHSYVEENGLEYDLELG 260

Query: 174 TALIDFYAKCGWVRGAEQVFDRMPVKDVATWSAMILGLAINGNNHMALELFEEMEKIGPK 353
           TALIDFY KCGWV+GAE+VF++MPVKDVATWSAMILGLAINGNN MALELFE+MEK+GPK
Sbjct: 261 TALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPK 320

Query: 354 PNAVTFVGVLTACNHKNLLGEAWRLFGLMSEKYGITPSIEHYGCM 488
           PN VTFVGVLTACNHK+L GE+ RLFG+MSEKY ITPSIEHYGC+
Sbjct: 321 PNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSIEHYGCV 365



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
 Frame = +3

Query: 90  TAVGAFEEGKGIH--SYVXXXXXXXXXXXXTALIDFYAKCGWVRGAEQVFDRMPVKDVAT 263
           + + AF +   IH    V            T+L+  Y  CG V  A  VFD+MP+++ A+
Sbjct: 125 SVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLRNEAS 184

Query: 264 WSAMILGLAINGNNHMALELFEEMEKIGP-----KPNAVTFVGVLTAC 392
           +SAM+ G   NG     ++LF E++K        K N    V VL AC
Sbjct: 185 YSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNAC 232


>ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 522

 Score =  209 bits (533), Expect = 1e-52
 Identities = 107/164 (65%), Positives = 122/164 (74%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   GIELFRDLKRSFARVRPNGPLLVSVLSACTAVGAFEEGKGIHSYVXXXXXXXXXXXX--T 176
           GI+LFR+LK     V+PN  LL SVLSAC +VGAFEEGK IH+YV              T
Sbjct: 213 GIQLFRELKDR--NVKPNNSLLASVLSACASVGAFEEGKWIHAYVDQNKSQCYYELELGT 270

Query: 177 ALIDFYAKCGWVRGAEQVFDRMPVKDVATWSAMILGLAINGNNHMALELFEEMEKIGPKP 356
           ALIDFY KCG V  A++VF  M  KDVA WSAM+LGLAIN  N  ALELFEEMEK+GP+P
Sbjct: 271 ALIDFYTKCGCVEPAQRVFGNMKTKDVAAWSAMVLGLAINAKNQEALELFEEMEKVGPRP 330

Query: 357 NAVTFVGVLTACNHKNLLGEAWRLFGLMSEKYGITPSIEHYGCM 488
           NAVTF+GVLTACNHK+L GEA +LFG MS+KYGI  SIEHYGC+
Sbjct: 331 NAVTFIGVLTACNHKDLFGEALKLFGYMSDKYGIVASIEHYGCV 374


>gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  156 bits (394), Expect = 2e-36
 Identities = 79/159 (49%), Positives = 100/159 (62%)
 Frame = +3

Query: 12  LFRDLKRSFARVRPNGPLLVSVLSACTAVGAFEEGKGIHSYVXXXXXXXXXXXXTALIDF 191
           LF +++   ARV PN   +VSVLSAC  +GA E GK +HSYV            TAL+DF
Sbjct: 309 LFSEMQ--LARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDF 366

Query: 192 YAKCGWVRGAEQVFDRMPVKDVATWSAMILGLAINGNNHMALELFEEMEKIGPKPNAVTF 371
           YAKCG +  A + F+ MPVK+  TW+A+I G+A NG    ALELF  M + G +P  VTF
Sbjct: 367 YAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTF 426

Query: 372 VGVLTACNHKNLLGEAWRLFGLMSEKYGITPSIEHYGCM 488
           +GVL AC+H  L+ E  R F  M+  YGI P +EHYGCM
Sbjct: 427 IGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCM 465



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/109 (42%), Positives = 60/109 (55%)
 Frame = +3

Query: 66  LVSVLSACTAVGAFEEGKGIHSYVXXXXXXXXXXXXTALIDFYAKCGWVRGAEQVFDRMP 245
           LVSV++AC  +G  + GK +  +V            TAL+D YAKCG +  A ++FD M 
Sbjct: 224 LVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQ 283

Query: 246 VKDVATWSAMILGLAINGNNHMALELFEEMEKIGPKPNAVTFVGVLTAC 392
            +DV  WSAMI G         AL LF EM+    +PN VT V VL+AC
Sbjct: 284 SRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSAC 332



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/105 (31%), Positives = 53/105 (50%)
 Frame = +3

Query: 78  LSACTAVGAFEEGKGIHSYVXXXXXXXXXXXXTALIDFYAKCGWVRGAEQVFDRMPVKDV 257
           L +C+ + A + G+G+ +Y             ++LI  YA CG V  A  VFD      V
Sbjct: 127 LKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGV 186

Query: 258 ATWSAMILGLAINGNNHMALELFEEMEKIGPKPNAVTFVGVLTAC 392
             W+A++     NG+    +E+F+ M ++G   + VT V V+TAC
Sbjct: 187 VMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTAC 231


>gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
          Length = 492

 Score =  153 bits (386), Expect = 2e-35
 Identities = 79/161 (49%), Positives = 104/161 (64%)
 Frame = +3

Query: 6   IELFRDLKRSFARVRPNGPLLVSVLSACTAVGAFEEGKGIHSYVXXXXXXXXXXXXTALI 185
           +EL+R++    A + P+   LVSV+SAC+ +GA   G  +H +V            TALI
Sbjct: 105 LELWREMHA--ASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALI 162

Query: 186 DFYAKCGWVRGAEQVFDRMPVKDVATWSAMILGLAINGNNHMALELFEEMEKIGPKPNAV 365
           D YAKCG +  A++VFDRMP KDV TWS+MI+GLA +G  H +L LF +M   G KPN V
Sbjct: 163 DMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGV 222

Query: 366 TFVGVLTACNHKNLLGEAWRLFGLMSEKYGITPSIEHYGCM 488
           TFVGVL AC H  L+ E  + F  M+E +GI P++EHYGCM
Sbjct: 223 TFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCM 263