BLASTX nr result

ID: Glycyrrhiza24_contig00029967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029967
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526219.1| PREDICTED: uncharacterized protein LOC100810...   114   1e-23
ref|XP_003526206.1| PREDICTED: uncharacterized protein LOC100802...   112   4e-23
ref|XP_003607649.1| RING finger protein [Medicago truncatula] gi...   108   3e-22
ref|XP_003540993.1| PREDICTED: uncharacterized protein LOC100819...   105   5e-21
ref|NP_001190129.1| RING/U-box domain-containing protein [Arabid...    84   1e-14

>ref|XP_003526219.1| PREDICTED: uncharacterized protein LOC100810607 [Glycine max]
          Length = 262

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/78 (74%), Positives = 63/78 (80%), Gaps = 6/78 (7%)
 Frame = +1

Query: 1   LTPCNHMFHEDCIVTWLTSKGQCPVCRFVILEGVVRDNPSSF------NLQPTDLTAGEL 162
           LTPCNHMFHEDCIV WLTSKGQCPVCRFVI E + R N SSF      NL+P++L  GEL
Sbjct: 186 LTPCNHMFHEDCIVPWLTSKGQCPVCRFVICE-IGRGNHSSFNNNDIANLEPSNLINGEL 244

Query: 163 LSILRAMEEAFQLGSINY 216
           LSILRAMEEAFQLGS+ Y
Sbjct: 245 LSILRAMEEAFQLGSMTY 262


>ref|XP_003526206.1| PREDICTED: uncharacterized protein LOC100802085 [Glycine max]
          Length = 262

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/78 (73%), Positives = 62/78 (79%), Gaps = 6/78 (7%)
 Frame = +1

Query: 1   LTPCNHMFHEDCIVTWLTSKGQCPVCRFVILEGVVRDNPSSF------NLQPTDLTAGEL 162
           LTPCNHMFHEDCIV WLTSKGQCPVCRFVI E + R N SSF      NL+P++L  GEL
Sbjct: 186 LTPCNHMFHEDCIVPWLTSKGQCPVCRFVICE-IGRGNHSSFNNNDIANLEPSNLINGEL 244

Query: 163 LSILRAMEEAFQLGSINY 216
           LSILRAMEEAFQLG + Y
Sbjct: 245 LSILRAMEEAFQLGRMTY 262


>ref|XP_003607649.1| RING finger protein [Medicago truncatula]
           gi|355508704|gb|AES89846.1| RING finger protein
           [Medicago truncatula]
          Length = 276

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/78 (67%), Positives = 60/78 (76%), Gaps = 6/78 (7%)
 Frame = +1

Query: 1   LTPCNHMFHEDCIVTWLTSKGQCPVCRFVILEGVVRDNPSSF------NLQPTDLTAGEL 162
           LTPCNHMFHEDCIVTWLTSKGQCPVCRFVI EG  ++  S F      NL+P  + + EL
Sbjct: 200 LTPCNHMFHEDCIVTWLTSKGQCPVCRFVIFEG-AKEKTSPFNRNDITNLEPDGVISAEL 258

Query: 163 LSILRAMEEAFQLGSINY 216
           LS+LRAMEEAF L S+NY
Sbjct: 259 LSVLRAMEEAFHLESVNY 276


>ref|XP_003540993.1| PREDICTED: uncharacterized protein LOC100819139 [Glycine max]
          Length = 262

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/78 (67%), Positives = 59/78 (75%), Gaps = 6/78 (7%)
 Frame = +1

Query: 1   LTPCNHMFHEDCIVTWLTSKGQCPVCRFVILEGVVRDNPSSF------NLQPTDLTAGEL 162
           LTPCNHMFHEDCIV WLTSKGQCPVCRFVI E + R N SSF      NL+P+++   E 
Sbjct: 186 LTPCNHMFHEDCIVPWLTSKGQCPVCRFVIFE-IERGNQSSFNNNDIANLEPSNIINREF 244

Query: 163 LSILRAMEEAFQLGSINY 216
           LSILRAMEE FQL S+ Y
Sbjct: 245 LSILRAMEEDFQLSSMTY 262


>ref|NP_001190129.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|332646302|gb|AEE79823.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 266

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/76 (53%), Positives = 50/76 (65%), Gaps = 7/76 (9%)
 Frame = +1

Query: 1   LTPCNHMFHEDCIVTWLTSKGQCPVCRFVILEGVVRDNPSSFN-------LQPTDLTAGE 159
           LTPC HMFHE+CIV WL +KGQCPVCRFVIL+   +D+    N       +   DL   E
Sbjct: 187 LTPCKHMFHEECIVPWLKTKGQCPVCRFVILKPTKQDSSPPANGSNLTGDMTTNDLFTLE 246

Query: 160 LLSILRAMEEAFQLGS 207
           LLS++RAMEE F  G+
Sbjct: 247 LLSVVRAMEETFLFGN 262


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