BLASTX nr result

ID: Glycyrrhiza24_contig00029962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029962
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627047.1| Auxin-responsive protein IAA18 [Medicago tru...    85   5e-15
ref|XP_002283588.2| PREDICTED: auxin-responsive protein IAA26-li...    82   3e-14
emb|CBI36050.3| unnamed protein product [Vitis vinifera]               82   3e-14
ref|XP_003597669.1| Auxin-responsive protein IAA18 [Medicago tru...    82   4e-14
ref|NP_001236774.1| uncharacterized protein LOC100305794 [Glycin...    79   4e-13

>ref|XP_003627047.1| Auxin-responsive protein IAA18 [Medicago truncatula]
           gi|355521069|gb|AET01523.1| Auxin-responsive protein
           IAA18 [Medicago truncatula]
          Length = 271

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/71 (59%), Positives = 50/71 (70%)
 Frame = -2

Query: 214 GWPPIRSIRKNLAXXXXXXXXXXSQHVVPDDKVASNKVPIIGNTGKGLFVKINMDGIPIG 35
           GWPPIRS RKN+A          S+ +V D  +  +  PI  N+GKGLFVKINMDG+PIG
Sbjct: 110 GWPPIRSFRKNIASGSSSKPPTESRPMVQDKVIVDSNKPI-SNSGKGLFVKINMDGVPIG 168

Query: 34  RKVDINAYDSY 2
           RK+DINAYDSY
Sbjct: 169 RKIDINAYDSY 179


>ref|XP_002283588.2| PREDICTED: auxin-responsive protein IAA26-like [Vitis vinifera]
          Length = 364

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 45/71 (63%), Positives = 50/71 (70%)
 Frame = -2

Query: 214 GWPPIRSIRKNLAXXXXXXXXXXSQHVVPDDKVASNKVPIIGNTGKGLFVKINMDGIPIG 35
           GWPPIRS RKNLA          SQ VVP+ K+AS K   +G   KGLFVKINMDG+PIG
Sbjct: 194 GWPPIRSFRKNLASSSSSKPANESQDVVPN-KIASEKPVEVGK--KGLFVKINMDGVPIG 250

Query: 34  RKVDINAYDSY 2
           RKVD+ AYDSY
Sbjct: 251 RKVDLTAYDSY 261


>emb|CBI36050.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 45/71 (63%), Positives = 50/71 (70%)
 Frame = -2

Query: 214 GWPPIRSIRKNLAXXXXXXXXXXSQHVVPDDKVASNKVPIIGNTGKGLFVKINMDGIPIG 35
           GWPPIRS RKNLA          SQ VVP+ K+AS K   +G   KGLFVKINMDG+PIG
Sbjct: 194 GWPPIRSFRKNLASSSSSKPANESQDVVPN-KIASEKPVEVGK--KGLFVKINMDGVPIG 250

Query: 34  RKVDINAYDSY 2
           RKVD+ AYDSY
Sbjct: 251 RKVDLTAYDSY 261


>ref|XP_003597669.1| Auxin-responsive protein IAA18 [Medicago truncatula]
           gi|355486717|gb|AES67920.1| Auxin-responsive protein
           IAA18 [Medicago truncatula]
          Length = 269

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 42/73 (57%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
 Frame = -2

Query: 214 GWPPIRSIRKNLAXXXXXXXXXXSQHVVPD--DKVASNKVPIIGNTGKGLFVKINMDGIP 41
           GWPPIRS RKNLA                D  + V++ K PI  N GKGLFVKINMDG+P
Sbjct: 99  GWPPIRSFRKNLATSSSSKPSPPESQTQQDMHNNVSAGKKPIDNNYGKGLFVKINMDGVP 158

Query: 40  IGRKVDINAYDSY 2
           IGRKVD+NAY SY
Sbjct: 159 IGRKVDLNAYHSY 171


>ref|NP_001236774.1| uncharacterized protein LOC100305794 [Glycine max]
           gi|255626619|gb|ACU13654.1| unknown [Glycine max]
          Length = 217

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 47/75 (62%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
 Frame = -2

Query: 214 GWPPIRSIRKNLAXXXXXXXXXXS----QHVVPDDKVASNKVPIIGNTGKGLFVKINMDG 47
           GWPPIRS RKN+A          S    Q+VVP  KVAS K      +GKGLFVKINMDG
Sbjct: 39  GWPPIRSFRKNIASGSTSKLPSGSHQQHQNVVPY-KVASQKPT--DKSGKGLFVKINMDG 95

Query: 46  IPIGRKVDINAYDSY 2
           +PIGRKVDINAYDSY
Sbjct: 96  VPIGRKVDINAYDSY 110


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