BLASTX nr result

ID: Glycyrrhiza24_contig00029961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029961
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72798.1| hypothetical protein VITISV_031251 [Vitis vinifera]    67   2e-09
emb|CAN69387.1| hypothetical protein VITISV_027663 [Vitis vinifera]    66   3e-09
gb|AAD12997.1| gag-pol polyprotein [Zea mays]                          64   2e-08
gb|AAD12994.1| gag-pol polyprotein [Zea mays]                          64   2e-08
emb|CAN66383.1| hypothetical protein VITISV_020130 [Vitis vinifera]    63   3e-08

>emb|CAN72798.1| hypothetical protein VITISV_031251 [Vitis vinifera]
          Length = 615

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/67 (52%), Positives = 47/67 (70%)
 Frame = -1

Query: 206 TRVKGFKNKRKPSEAEVNLSVGNGNKVDVQFIGLVELKLESGFVLLLKDTVYVPSMRQNL 27
           T ++G +N RKPSE E  L VG+   +DV+ IG+V L+L+ GF L+L +   VPS R+NL
Sbjct: 229 TSLQGIRNLRKPSEKESKLKVGSDIGIDVEHIGVVVLELDFGFRLVLDNVFCVPSFRRNL 288

Query: 26  ISLSKLD 6
           ISLS LD
Sbjct: 289 ISLSVLD 295


>emb|CAN69387.1| hypothetical protein VITISV_027663 [Vitis vinifera]
          Length = 1524

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/60 (51%), Positives = 46/60 (76%)
 Frame = -1

Query: 185 NKRKPSEAEVNLSVGNGNKVDVQFIGLVELKLESGFVLLLKDTVYVPSMRQNLISLSKLD 6
           NKRKPS+ E  + +G+G+KV V+F G+++L+L +   LLL D  Y+PS+R+NLIS+S LD
Sbjct: 299 NKRKPSKHEEFVYMGDGSKVKVEFFGMIKLRLATESFLLLHDVTYIPSLRRNLISISILD 358


>gb|AAD12997.1| gag-pol polyprotein [Zea mays]
          Length = 1406

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/66 (45%), Positives = 47/66 (71%)
 Frame = -1

Query: 200 VKGFKNKRKPSEAEVNLSVGNGNKVDVQFIGLVELKLESGFVLLLKDTVYVPSMRQNLIS 21
           ++G +  ++  +    + V NG +  V+ IG + LKL +GFVLLL+D +YVPS+R+NLIS
Sbjct: 315 LQGLRTSQRLPKGRRTIRVANGVEAAVEAIGDIHLKLVNGFVLLLRDVLYVPSLRRNLIS 374

Query: 20  LSKLDD 3
           +S+LDD
Sbjct: 375 VSRLDD 380


>gb|AAD12994.1| gag-pol polyprotein [Zea mays]
          Length = 595

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/66 (45%), Positives = 47/66 (71%)
 Frame = -1

Query: 200 VKGFKNKRKPSEAEVNLSVGNGNKVDVQFIGLVELKLESGFVLLLKDTVYVPSMRQNLIS 21
           ++G +  ++  +    + V NG +  V+ IG + LKL +GFVLLL+D +YVPS+R+NLIS
Sbjct: 315 LQGLRTSQRLPKGRRTIRVANGVEAAVEAIGDIHLKLVNGFVLLLRDVLYVPSLRRNLIS 374

Query: 20  LSKLDD 3
           +S+LDD
Sbjct: 375 VSRLDD 380


>emb|CAN66383.1| hypothetical protein VITISV_020130 [Vitis vinifera]
          Length = 790

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/60 (48%), Positives = 45/60 (75%)
 Frame = -1

Query: 185 NKRKPSEAEVNLSVGNGNKVDVQFIGLVELKLESGFVLLLKDTVYVPSMRQNLISLSKLD 6
           NKR+P + E  + +G+G+KV V+F G+++L+L +   LLL D  Y+PS+R+NLIS+S LD
Sbjct: 121 NKRRPPKHEEFVYMGDGSKVKVEFFGMIKLRLATKSFLLLHDVAYIPSLRRNLISISILD 180


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