BLASTX nr result

ID: Glycyrrhiza24_contig00029931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029931
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627859.1| Pentatricopeptide repeat-containing protein ...    84   9e-15
ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10

>ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355521881|gb|AET02335.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 731

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 49/81 (60%), Positives = 51/81 (62%)
 Frame = -2

Query: 246 KIYRCFSDPDDGSENKVSQMFWDHVVERGLMSRNTMNKIQQMLI**QSCCLSNPSRLEDS 67
           KIYRCFS  D  S+NKVSQMFWDHVVERGLMSRNTM KIQQM                  
Sbjct: 549 KIYRCFSALD-ASQNKVSQMFWDHVVERGLMSRNTMYKIQQMPF---------------- 591

Query: 66  SYNCRLCIASGYQRVFLHVFT 4
                  I+SGYQRVFLHVFT
Sbjct: 592 -------ISSGYQRVFLHVFT 605


>ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Glycine max]
          Length = 587

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/44 (75%), Positives = 39/44 (88%)
 Frame = -2

Query: 246 KIYRCFSDPDDGSENKVSQMFWDHVVERGLMSRNTMNKIQQMLI 115
           K+YRCFS   D +ENKVSQ+FW+HV++RGLMSRNTMNKIQQ LI
Sbjct: 545 KLYRCFST-SDANENKVSQIFWNHVMDRGLMSRNTMNKIQQKLI 587


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