BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029929
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595543.1| Pentatricopeptide repeat-containing protein ...   161   6e-38
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,...   153   1e-35
ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   148   5e-34

>ref|XP_003595543.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484591|gb|AES65794.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 958

 Score =  161 bits (407), Expect = 6e-38
 Identities = 82/104 (78%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
 Frame = +3

Query: 3   KCGSVKHSRIVFDRLSD-KNSVSCTAMLSTYCQNKEYEAVLDLVREWGIADLYGFGTVLR 179
           KCG V+HSRIVF+RLSD KN+VS TAML  YCQNKEY+ VLDLVRE G  + Y FG VLR
Sbjct: 637 KCGCVRHSRIVFERLSDEKNNVSWTAMLGVYCQNKEYQNVLDLVRERGDLNFYAFGIVLR 696

Query: 180 ACSGLAAVKQGKEVHCKYVRKGGWKDVIIESALVDLYAKCGCVD 311
           ACSGLAAV  GKEVHC YVRKGG KDVIIESALVDLYAKCG VD
Sbjct: 697 ACSGLAAVNHGKEVHCMYVRKGGSKDVIIESALVDLYAKCGMVD 740



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
 Frame = +3

Query: 12  SVKHSRIVFDRLSDKNSVSC-TAMLSTYCQNKEYEAVLDLV----REWGIA-DLYGFGTV 173
           +V  +R VFD L  K+ V C T+++S + +N  ++  L       R  G+  D Y FGT+
Sbjct: 537 AVDDARRVFDELFVKDDVFCWTSIISCFTRNDMFKESLKFFYVMNRVRGVVPDGYTFGTI 596

Query: 174 LRACSGLAAVKQGKEVHCKYVRKGGWKDVIIESALVDLYAKCGCV 308
           L AC+ L  ++QGKEVH K V  G   +V++ES+L+D+Y KCGCV
Sbjct: 597 LTACANLGLLRQGKEVHGKVVGLGFGGNVVVESSLLDMYGKCGCV 641


>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/104 (70%), Positives = 89/104 (85%), Gaps = 1/104 (0%)
 Frame = +3

Query: 3   KCGSVKHSRIVFDRLSDKNSVSCTAMLSTYCQNKEYEAVLDLVREWGIAD-LYGFGTVLR 179
           KCG V  S+ VFDR+S KNSVS +A+L  +CQN ++E+V+ + RE G AD LY FGTVLR
Sbjct: 302 KCGLVDESQRVFDRMSVKNSVSWSALLGGFCQNGDFESVIRIFREMGEADDLYSFGTVLR 361

Query: 180 ACSGLAAVKQGKEVHCKYVRKGGWKDVIIESALVDLYAKCGCVD 311
           AC+GLAAV+QGKEVHC+YVR+GGW+DVIIESALVDLYAKCGC+D
Sbjct: 362 ACAGLAAVRQGKEVHCQYVRRGGWRDVIIESALVDLYAKCGCID 405



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 5/101 (4%)
 Frame = +3

Query: 24  SRIVFDRLSDKNSVSCTAMLSTYCQNKEYEAVLD----LVREWGIA-DLYGFGTVLRACS 188
           +R +FD L + +++  T+++S Y +N  Y+  L     + R+ G+A D + FGTVL AC 
Sbjct: 207 ARRLFDELLEPDAICWTSVISAYTRNDMYDKALGFFYLMQRKLGLAPDGFTFGTVLTACG 266

Query: 189 GLAAVKQGKEVHCKYVRKGGWKDVIIESALVDLYAKCGCVD 311
            L  +KQGKEVH K +  G   +V++ES+LVD+Y KCG VD
Sbjct: 267 NLRRLKQGKEVHAKLITSGFSGNVVVESSLVDMYGKCGLVD 307


>ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Glycine max]
          Length = 611

 Score =  150 bits (378), Expect = 1e-34
 Identities = 69/104 (66%), Positives = 84/104 (80%), Gaps = 1/104 (0%)
 Frame = +3

Query: 3   KCGSVKHSRIVFDRLSDKNSVSCTAMLSTYCQNKEYEAVLDLVREW-GIADLYGFGTVLR 179
           KCG V  +R+VFD L +KN V+ TAML  YC N E  +VL LVREW  + D+Y FGT++R
Sbjct: 306 KCGEVGCARVVFDGLEEKNEVALTAMLGVYCHNGECGSVLGLVREWRSMVDVYSFGTIIR 365

Query: 180 ACSGLAAVKQGKEVHCKYVRKGGWKDVIIESALVDLYAKCGCVD 311
           ACSGLAAV+QG EVHC+YVR+GGW+DV++ESALVDLYAKCG VD
Sbjct: 366 ACSGLAAVRQGNEVHCQYVRRGGWRDVVVESALVDLYAKCGSVD 409



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
 Frame = +3

Query: 15  VKHSRIVFDRLSDKNSVSCTAMLSTYCQN---KEYEAVLDLVREWGIA---DLYGFGTVL 176
           V  +R VFD L + + V  TA++ST  +N   +E   V   + + G+    D + FGT+L
Sbjct: 207 VDDARKVFDELPEPDYVCWTAVISTLARNDRFREAVRVFFAMHDGGLGLEVDGFTFGTLL 266

Query: 177 RACSGLAAVKQGKEVHCKYVRKGGWKDVIIESALVDLYAKCG 302
            AC  L  ++ G+EVH K V  G   +V +ES+L+D+Y KCG
Sbjct: 267 NACGNLGWLRMGREVHGKVVTLGMKGNVFVESSLLDMYGKCG 308


>ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
           gi|449493172|ref|XP_004159212.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
          Length = 605

 Score =  149 bits (377), Expect = 2e-34
 Identities = 65/103 (63%), Positives = 87/103 (84%)
 Frame = +3

Query: 3   KCGSVKHSRIVFDRLSDKNSVSCTAMLSTYCQNKEYEAVLDLVREWGIADLYGFGTVLRA 182
           KCG+V+ S+ +FDR+S++NSVS +A+L+ YC N +YE  ++L RE    DLY FGTV+RA
Sbjct: 311 KCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVDLYSFGTVIRA 370

Query: 183 CSGLAAVKQGKEVHCKYVRKGGWKDVIIESALVDLYAKCGCVD 311
           C+GLAAV  GKE+HC+Y+RKGGW+DVI+ESALVDLYAKCGC++
Sbjct: 371 CAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCIN 413



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
 Frame = +3

Query: 24  SRIVFDRLSDKNSVSCTAMLSTYCQNKEYEAVLDLVREWGIA-----DLYGFGTVLRACS 188
           +R +FD L + + V  T ++S + +N  YE  L        A     D Y FG+VL AC 
Sbjct: 216 ARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACG 275

Query: 189 GLAAVKQGKEVHCKYVRKGGWKDVIIESALVDLYAKCGCVD 311
            L  ++QG+E+H K +  G   +V+ ES+LVD+Y KCG V+
Sbjct: 276 NLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVE 316


>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  148 bits (373), Expect = 5e-34
 Identities = 65/103 (63%), Positives = 86/103 (83%)
 Frame = +3

Query: 3   KCGSVKHSRIVFDRLSDKNSVSCTAMLSTYCQNKEYEAVLDLVREWGIADLYGFGTVLRA 182
           KCGSV  S+ +FDR+  KNSVS +A+L  YCQN ++++V+ + R+    DLY FGT+LR 
Sbjct: 310 KCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLYCFGTILRT 369

Query: 183 CSGLAAVKQGKEVHCKYVRKGGWKDVIIESALVDLYAKCGCVD 311
           C+GLAAV+QGKEVHC+Y+RKGGW+DVI+ESALVDLYAKCGC++
Sbjct: 370 CAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIE 412



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
 Frame = +3

Query: 24  SRIVFDRLSDKNSVSCTAMLSTYCQNKEYEAVL----DLVREWGIA-DLYGFGTVLRACS 188
           +R +FD L + +++  T+++S   +N  ++  L     + R+ G+  D + FGTVL AC 
Sbjct: 215 ARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACG 274

Query: 189 GLAAVKQGKEVHCKYVRKGGWKDVIIESALVDLYAKCGCV 308
            L  +KQGKEVH K +  G   +V++ES+LVD+Y KCG V
Sbjct: 275 NLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSV 314