BLASTX nr result

ID: Glycyrrhiza24_contig00029914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029914
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a...   172   3e-41
ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicag...   163   2e-38
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h...   125   5e-27
ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis...   119   2e-25
ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a...   114   8e-24

>ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
          Length = 1671

 Score =  172 bits (435), Expect = 3e-41
 Identities = 85/107 (79%), Positives = 94/107 (87%)
 Frame = -1

Query: 323 EKPKIFGMTASPIGKRGISSTLNCEAQILELENILDSQRYTVEDRKEMDGCIHSAKESCR 144
           EKPKIFGMTASP+GK+G+SST++CE QI ELE+ILDSQRYTVEDR EMD C+ SAKESCR
Sbjct: 219 EKPKIFGMTASPVGKKGVSSTMDCEDQISELESILDSQRYTVEDRTEMDRCVPSAKESCR 278

Query: 143 YYDQARFPALSLKPKIEALWLKSDELLSEFQSKYKDVDNKFKTLHQK 3
           YYDQARF ALSLKPKIEAL  K D LLSE QS YKDV+NKFKTL Q+
Sbjct: 279 YYDQARFSALSLKPKIEALSFKFDALLSENQSNYKDVENKFKTLSQR 325


>ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
           gi|355492284|gb|AES73487.1| Endoribonuclease Dicer-like
           protein [Medicago truncatula]
          Length = 1758

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/107 (75%), Positives = 89/107 (83%)
 Frame = -1

Query: 323 EKPKIFGMTASPIGKRGISSTLNCEAQILELENILDSQRYTVEDRKEMDGCIHSAKESCR 144
           EKPKIFGMTASP+GKRG+SSTL CE QI +LENILDS+ Y V+DR EMD  I SAKESCR
Sbjct: 203 EKPKIFGMTASPVGKRGVSSTLVCEGQISDLENILDSRSYVVKDRTEMDVYIPSAKESCR 262

Query: 143 YYDQARFPALSLKPKIEALWLKSDELLSEFQSKYKDVDNKFKTLHQK 3
           +YD ARF ALSLKPKIEA W K D LLSEFQS YKD+D KFK LHQ+
Sbjct: 263 FYDPARFHALSLKPKIEASWSKCDVLLSEFQSDYKDMDQKFKALHQR 309


>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/110 (54%), Positives = 81/110 (73%), Gaps = 4/110 (3%)
 Frame = -1

Query: 320 KPKIFGMTASPIGKRGISSTLNCEAQILELENILDSQRYTVEDRKEMDGCIHSAKESCRY 141
           KPKIFGMTASP+  +G+ S+ NC+ Q+ ELE +LDS  YT+EDR EM+ C+ SAKESCR+
Sbjct: 199 KPKIFGMTASPVVSKGVLSSNNCDGQMSELECVLDSLIYTIEDRTEMEACVPSAKESCRF 258

Query: 140 YDQARFPALSLKPKIEALWLKSDELLSEFQS----KYKDVDNKFKTLHQK 3
           +D A+F +L LK K+EA WLK+D  LS  QS     +KD+D+K K L ++
Sbjct: 259 FDPAQFSSLDLKAKVEASWLKTDGSLSNLQSSLQTSHKDMDDKLKNLRKR 308


>ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
           gi|223544646|gb|EEF46162.1| Ribonuclease III, putative
           [Ricinus communis]
          Length = 1660

 Score =  119 bits (299), Expect = 2e-25
 Identities = 60/110 (54%), Positives = 78/110 (70%), Gaps = 4/110 (3%)
 Frame = -1

Query: 320 KPKIFGMTASPIGKRGISSTLNCEAQILELENILDSQRYTVEDRKEMDGCIHSAKESCRY 141
           KPKIFGMTASP+ ++G+SS ++CE QI ELE ILDSQ YT+EDR EMD  + SA+E C++
Sbjct: 216 KPKIFGMTASPVVQKGVSSAVDCEDQISELETILDSQIYTIEDRTEMDVHVPSAREICKF 275

Query: 140 YDQARFPALSLKPKIEALWLKSD----ELLSEFQSKYKDVDNKFKTLHQK 3
           YD A+  +  +K KIEA W K D     L    QS YKD D+++KTL Q+
Sbjct: 276 YDIAQLYSSDIKSKIEASWSKFDASLLSLQGSIQSSYKDADDRYKTLQQR 325


>ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
          Length = 1359

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/110 (51%), Positives = 78/110 (70%), Gaps = 4/110 (3%)
 Frame = -1

Query: 320 KPKIFGMTASPIGKRGISSTLNCEAQILELENILDSQRYTVEDRKEMDGCIHSAKESCRY 141
           KPKIFGMTASP+ ++G+SS+++CE QI +LE+ILD+Q Y +ED+KE++  + SAKE C +
Sbjct: 193 KPKIFGMTASPVIRKGVSSSVDCECQIADLESILDAQVYAIEDKKEVEIYVPSAKEICIF 252

Query: 140 YDQARFPALSLKPKIEALWLKSDELLSE----FQSKYKDVDNKFKTLHQK 3
           Y+ A    + LK KIEALW K D  LS      Q  YKDVD+K K L ++
Sbjct: 253 YEPAMPQTMELKAKIEALWFKFDASLSNSQEAMQGHYKDVDSKLKALKKR 302


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