BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029913
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containi...   152   5e-35
ref|XP_003524395.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   138   8e-31
ref|XP_003630764.1| Pentatricopeptide repeat-containing protein ...   116   2e-24
ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
emb|CBI28050.3| unnamed protein product [Vitis vinifera]              103   2e-20

>ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 724

 Score =  152 bits (383), Expect = 5e-35
 Identities = 104/193 (53%), Positives = 111/193 (57%), Gaps = 8/193 (4%)
 Frame = +3

Query: 21  FTTLTLHLQRSLSFS--------HSLQKQQNWVRGFIQRNQQTAIQYSSLNPLLEHETVS 176
           F TL L L+ SL FS        H           FIQR Q TA +YSS          S
Sbjct: 10  FNTLQLQLRHSLFFSKPKLCRVYHPRPSTNIITFSFIQRTQ-TATKYSS----------S 58

Query: 177 KNSFPKKTPSAASHRHTRGYSLEPKAXXXXXXXXYRVIERGKKNENVVGKKSKDTPQVKL 356
                K+ P A         S EPKA          V ER KK +     K KD P+VKL
Sbjct: 59  LEIVTKRAPPA---------SFEPKAGISSTSSSSEVSERVKKKKKKKKNKDKDCPEVKL 109

Query: 357 KVALDMCSKRGDVMGALSLYDSARLEGLKLQQHHYTVLLYLCSSAAVGVVRPAKSGSGAR 536
           K ALDMCSKRGDVMGALSLYDSA  EG+KL QHHYTVLLYLCSSAAVGVVRPAKSGSGAR
Sbjct: 110 KNALDMCSKRGDVMGALSLYDSAISEGVKLGQHHYTVLLYLCSSAAVGVVRPAKSGSGAR 169

Query: 537 TLNALVSSPSNEV 575
           TLN+ V   SNEV
Sbjct: 170 TLNSHVY--SNEV 180


>ref|XP_003524395.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32230, mitochondrial-like [Glycine max]
          Length = 540

 Score =  138 bits (347), Expect = 8e-31
 Identities = 73/90 (81%), Positives = 79/90 (87%)
 Frame = +3

Query: 309 ENVVGKKSKDTPQVKLKVALDMCSKRGDVMGALSLYDSARLEGLKLQQHHYTVLLYLCSS 488
           E V  KK KD+P+VKLK  LDMCSKRGDVMGALSLYDSA  EG+KL QHHYT+LL+LCSS
Sbjct: 13  ERVKKKKDKDSPEVKLKNGLDMCSKRGDVMGALSLYDSAISEGVKLGQHHYTLLLFLCSS 72

Query: 489 AAVGVVRPAKSGSGARTLNALVSSPSNEVV 578
           AAVGVVRPAKSGSGARTLNALVS  SNE+V
Sbjct: 73  AAVGVVRPAKSGSGARTLNALVS--SNELV 100


>ref|XP_003630764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524786|gb|AET05240.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 702

 Score =  116 bits (291), Expect = 2e-24
 Identities = 79/158 (50%), Positives = 94/158 (59%), Gaps = 10/158 (6%)
 Frame = +3

Query: 117 QQTAIQYSSLNPLLEHETVSKNS---FPKKTPSAASHRHTRGYSLEPKAXXXXXXXXYRV 287
           +Q +IQ SS NP L+  T +KNS   F KKT S++S    +  S E K+        Y V
Sbjct: 32  KQPSIQCSSRNPPLD--TATKNSVRRFSKKTSSSSSSHTDKKVSFESKSVNSTS---YTV 86

Query: 288 IERGKKNENV------VGKKSKDTP-QVKLKVALDMCSKRGDVMGALSLYDSARLEGLKL 446
           +E+ KKNEN         KK KDTP Q KL+V+LD CSKRGD+ G               
Sbjct: 87  VEKKKKNENENKNEFEKKKKIKDTPPQAKLRVSLDQCSKRGDLKG--------------- 131

Query: 447 QQHHYTVLLYLCSSAAVGVVRPAKSGSGARTLNALVSS 560
             HHYTVLLYLCSSAA+G +RPAKSGSG RTLNA VSS
Sbjct: 132 --HHYTVLLYLCSSAAIGGLRPAKSGSGTRTLNAQVSS 167


>ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 816

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/96 (60%), Positives = 74/96 (77%)
 Frame = +3

Query: 288 IERGKKNENVVGKKSKDTPQVKLKVALDMCSKRGDVMGALSLYDSARLEGLKLQQHHYTV 467
           +E+G K   V      D+ +  L+V L+MCSK GDVMGAL LYDSA  EG++L Q+HYTV
Sbjct: 103 MEKGSKKNKV------DSQEGLLRVGLEMCSKNGDVMGALELYDSALREGIELGQYHYTV 156

Query: 468 LLYLCSSAAVGVVRPAKSGSGARTLNALVSSPSNEV 575
           LLYLCSSAA+GV+RPAKSG+G+R+L+ L  SPS+EV
Sbjct: 157 LLYLCSSAALGVIRPAKSGTGSRSLDML--SPSSEV 190


>emb|CBI28050.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score =  103 bits (258), Expect = 2e-20
 Identities = 52/84 (61%), Positives = 65/84 (77%)
 Frame = +3

Query: 288 IERGKKNENVVGKKSKDTPQVKLKVALDMCSKRGDVMGALSLYDSARLEGLKLQQHHYTV 467
           +E+G K   V      D+ +  L+V L+MCSK GDVMGAL LYDSA  EG++L Q+HYTV
Sbjct: 103 MEKGSKKNKV------DSQEGLLRVGLEMCSKNGDVMGALELYDSALREGIELGQYHYTV 156

Query: 468 LLYLCSSAAVGVVRPAKSGSGART 539
           LLYLCSSAA+GV+RPAKSG+G+RT
Sbjct: 157 LLYLCSSAALGVIRPAKSGTGSRT 180