BLASTX nr result
ID: Glycyrrhiza24_contig00029910
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00029910
(431 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819... 73 2e-14
ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817... 70 7e-13
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 67 1e-12
ref|XP_003605102.1| Peptide transporter PTR2 [Medicago truncatul... 68 8e-12
ref|XP_003599760.1| Peptide transporter PTR2 [Medicago truncatul... 68 8e-12
>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
Length = 1750
Score = 73.2 bits (178), Expect(2) = 2e-14
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Frame = +3
Query: 3 SKLTHATDCKLIFDDDGCHIQDKDTLRTIGVARVVGGLYTISPQDSFQFAPHTVNTFNSY 182
S+L H T L F D C IQ++ +L+ IG+ GLY ++ Q + + A N + +
Sbjct: 460 SQLCHHTPYTLNFTDTICSIQEQKSLKMIGLGESRDGLYYLT-QTNKECASSNYNISSIF 518
Query: 183 ---------KHDVWHLRLGHLSHEKLVQLHRDFSFIDCNKIANPCDTCHLAKQKKLPLPD 335
++ +WH RLGHLS ++ LH F FI N ++ CD CH AK +KLP
Sbjct: 519 SSANNVHIPENAIWHFRLGHLSSSRIALLHSQFPFI-VNDSSSVCDICHFAKHRKLPFVH 577
Query: 336 SF 341
S+
Sbjct: 578 SY 579
Score = 30.0 bits (66), Expect(2) = 2e-14
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2
Query: 392 FDMLHMDIWGPIS 430
FD++H DIWGPIS
Sbjct: 586 FDLIHFDIWGPIS 598
>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
Length = 2045
Score = 69.7 bits (169), Expect(2) = 7e-13
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Frame = +3
Query: 3 SKLTHATDCKLIFDDDGCHIQDKDTLRTIGVARVVGGLYTISPQDSFQFAPHTVNTF--- 173
SKL + +C+LIF C +Q+ + IG+ GLY + P A ++ T
Sbjct: 812 SKLVSSINCELIFSSTSCVLQEMNNHMKIGIVEAKHGLYHLIPNQLTTKAVNSTITHPRC 871
Query: 174 NSYKHDVWHLRLGHLSHEKLVQLHRDFSFIDCNKIANPCDTCHLAKQKKLPLPDSFSVSE 353
N D+WH RLGH S E++ + + + NK C+TCH AK KK+P S S +
Sbjct: 872 NVIPIDLWHFRLGHPSAERIQCMKTYYPLLRNNK-NFVCNTCHYAKHKKMPFSLSNSHAS 930
Query: 354 HPF 362
H F
Sbjct: 931 HAF 933
Score = 28.5 bits (62), Expect(2) = 7e-13
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 380 SEHPFDMLHMDIWGPIS 430
+ H FD+LHMDI GP S
Sbjct: 929 ASHAFDLLHMDIRGPCS 945
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 66.6 bits (161), Expect(2) = 1e-12
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Frame = +3
Query: 3 SKLTHATDCKLIFDDDGCHIQDKDTLRTIGVARVVGGLYTISPQD-SFQFAPHTVNTFNS 179
S LT + C++ FD+ C +QD +G+ + V LY + S ++ +
Sbjct: 342 SSLTKSMGCRIWFDETSCVLQDATRELMVGMGKQVANLYIVDLDSLSHPGTDSSITVASV 401
Query: 180 YKHDVWHLRLGHLSHEKLVQLHRDFSF-IDCNKIANPCDTCHLAKQKKLPLPDSFSVSEH 356
HD+WH RLGH S +KL + SF N C CH++KQK LP + S
Sbjct: 402 TSHDLWHKRLGHPSVQKLQPMSSLLSFPKQKNNTDFHCRVCHISKQKHLPFVSHNNKSSR 461
Query: 357 PF 362
PF
Sbjct: 462 PF 463
Score = 31.2 bits (69), Expect(2) = 1e-12
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 380 SEHPFDMLHMDIWGPIS 430
S PFD++H+D WGP S
Sbjct: 459 SSRPFDLIHIDTWGPFS 475
>ref|XP_003605102.1| Peptide transporter PTR2 [Medicago truncatula]
gi|355506157|gb|AES87299.1| Peptide transporter PTR2
[Medicago truncatula]
Length = 1313
Score = 67.8 bits (164), Expect(2) = 8e-12
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Frame = +3
Query: 3 SKLTHATDCKLIFDDDGCHIQDKDTLRTIGVARVVGGLYTISPQDSFQFAPHTVNTFNSY 182
SKL ++ F D C I D + + IG+ + GLY ++ Q + + T +S
Sbjct: 719 SKLIQVLSYQVNFLLDKCVIHDMKSQKMIGLCSLCDGLYRLNTASCSQESSVSSLTSHSS 778
Query: 183 ------KHDVWHLRLGHLSHEKLVQLHRDFSFIDCNKIANPCDTCHLAKQKKLPLPDSFS 344
+ +WH RLGHLS+++L ++H+ + I + A CD CH +KQ+KLP S S
Sbjct: 779 TISFIPSNAIWHFRLGHLSNQRLSKMHQLYFSISVDNKAT-CDVCHFSKQRKLPYNSSHS 837
Query: 345 VSEHPF 362
+++ F
Sbjct: 838 IAKSKF 843
Score = 26.9 bits (58), Expect(2) = 8e-12
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +2
Query: 371 YKVSEHPFDMLHMDIWGPIS 430
+ +++ F+ +H DIWGP++
Sbjct: 836 HSIAKSKFESVHFDIWGPLA 855
>ref|XP_003599760.1| Peptide transporter PTR2 [Medicago truncatula]
gi|355488808|gb|AES70011.1| Peptide transporter PTR2
[Medicago truncatula]
Length = 1282
Score = 67.8 bits (164), Expect(2) = 8e-12
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Frame = +3
Query: 3 SKLTHATDCKLIFDDDGCHIQDKDTLRTIGVARVVGGLYTISPQDSFQFAPHTVNTFNSY 182
SKL ++ F D C I D + + IG+ + GLY ++ Q + + T +S
Sbjct: 709 SKLIQVLSYQVNFLLDKCVIHDMKSQKMIGLCSLCDGLYRLNTASCSQESSVSSLTSHSS 768
Query: 183 ------KHDVWHLRLGHLSHEKLVQLHRDFSFIDCNKIANPCDTCHLAKQKKLPLPDSFS 344
+ +WH RLGHLS+++L ++H+ + I + A CD CH +KQ+KLP S S
Sbjct: 769 TISFIPSNAIWHFRLGHLSNQRLSKMHQLYFSISVDNKAT-CDVCHFSKQRKLPYNSSHS 827
Query: 345 VSEHPF 362
+++ F
Sbjct: 828 IAKSKF 833
Score = 26.9 bits (58), Expect(2) = 8e-12
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +2
Query: 371 YKVSEHPFDMLHMDIWGPIS 430
+ +++ F+ +H DIWGP++
Sbjct: 826 HSIAKSKFESVHFDIWGPLA 845