BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029901
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methy...   320   1e-85
ref|XP_003617839.1| Ribosomal RNA small subunit methyltransferas...   312   3e-83
ref|XP_002522772.1| ribosomal RNA small subunit methyltransferas...   249   2e-64
ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|2...   249   2e-64
ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methy...   248   9e-64

>ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methyltransferase B-like
           [Glycine max]
          Length = 528

 Score =  320 bits (820), Expect = 1e-85
 Identities = 162/195 (83%), Positives = 168/195 (86%)
 Frame = +2

Query: 50  LGLPFAAQPRKIVAXXXXXXXXXXXXXLPHRTRSTKISIPSSTNGAANHSLKTQKLNSEV 229
           +GLPF A+P+K                LPHRT ST ISIPS+  G  N  LKTQKLNSEV
Sbjct: 1   MGLPFPAEPQKTAPSSSSSSSPSKPLKLPHRTCSTNISIPSTAKGGGNRLLKTQKLNSEV 60

Query: 230 SPHRAVSAVRLMRIEHGGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELNHHDLRLVTD 409
           SPHRAVSAVRLMRIE GGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELNHHDLRLVTD
Sbjct: 61  SPHRAVSAVRLMRIELGGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELNHHDLRLVTD 120

Query: 410 IVGGTIRWRRYLDHLISSLCHDKDISSIEPLLLQILRIGFYEIVKLDMPPYAVVDENVRL 589
           IVGGTIRWRRYLDHLISSLCHDKDISS+EPLLLQILRIGFYEIVKLDMPPYAVVDENV+L
Sbjct: 121 IVGGTIRWRRYLDHLISSLCHDKDISSMEPLLLQILRIGFYEIVKLDMPPYAVVDENVKL 180

Query: 590 AKAALRPGAGNMVNG 634
           AK ALRPGAGNMVNG
Sbjct: 181 AKFALRPGAGNMVNG 195


>ref|XP_003617839.1| Ribosomal RNA small subunit methyltransferase [Medicago truncatula]
           gi|355519174|gb|AET00798.1| Ribosomal RNA small subunit
           methyltransferase [Medicago truncatula]
          Length = 654

 Score =  312 bits (800), Expect = 3e-83
 Identities = 163/202 (80%), Positives = 174/202 (86%), Gaps = 1/202 (0%)
 Frame = +2

Query: 32  MAQVVYLGLPFAAQPRKIVAXXXXXXXXXXXXXLPHRTRSTKISIPSSTN-GAANHSLKT 208
           MA+VVY+G+PF  QP K                L HRT ST ISI SSTN G+AN S+K 
Sbjct: 1   MAKVVYMGVPFLTQPHKTTITSSKPFK------LSHRTHSTNISILSSTNNGSANRSVKP 54

Query: 209 QKLNSEVSPHRAVSAVRLMRIEHGGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELNHH 388
           QKLNS++SPHRAVSAVRLMRIE GGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELN+ 
Sbjct: 55  QKLNSDISPHRAVSAVRLMRIELGGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELNNQ 114

Query: 389 DLRLVTDIVGGTIRWRRYLDHLISSLCHDKDISSIEPLLLQILRIGFYEIVKLDMPPYAV 568
           DLRLVT+IVGGTIRWRRYLDHLISSLCHDKDISS+EPLLLQILRIGFYEIVKLDMPPYAV
Sbjct: 115 DLRLVTEIVGGTIRWRRYLDHLISSLCHDKDISSMEPLLLQILRIGFYEIVKLDMPPYAV 174

Query: 569 VDENVRLAKAALRPGAGNMVNG 634
           VDENV+LAKAALRPGAGNMVNG
Sbjct: 175 VDENVQLAKAALRPGAGNMVNG 196


>ref|XP_002522772.1| ribosomal RNA small subunit methyltransferase B, putative [Ricinus
           communis] gi|223538010|gb|EEF39623.1| ribosomal RNA
           small subunit methyltransferase B, putative [Ricinus
           communis]
          Length = 527

 Score =  249 bits (637), Expect = 2e-64
 Identities = 129/166 (77%), Positives = 140/166 (84%), Gaps = 1/166 (0%)
 Frame = +2

Query: 140 RTRSTKISIPSSTNGAANHSLKTQKLNSEVSPHRAVSAVRLMRIEHGGAFADLLNEKGKG 319
           R    K S+ +   G  +   KTQKLN EVSPHRAVSAVRLMRIE GGAFADLLNEKGKG
Sbjct: 29  RANKPKKSLSAPRKGPVSPLKKTQKLNLEVSPHRAVSAVRLMRIEMGGAFADLLNEKGKG 88

Query: 320 SGENEMGYVQRTLGFRTRELNHHDLRLVTDIVGGTIRWRRYLDHLISSLCHDKD-ISSIE 496
           SGENEMGYV+RTLGFRT+ L+  DLRLVTD+VGGTIRWRR+LDHLI SL HD++   S+E
Sbjct: 89  SGENEMGYVERTLGFRTKNLDDRDLRLVTDVVGGTIRWRRFLDHLICSLFHDENTFRSME 148

Query: 497 PLLLQILRIGFYEIVKLDMPPYAVVDENVRLAKAALRPGAGNMVNG 634
           PLLLQILRIG YEIVKLDMPPYAVVDENVRLAK ALRPGAGNMVNG
Sbjct: 149 PLLLQILRIGAYEIVKLDMPPYAVVDENVRLAKVALRPGAGNMVNG 194


>ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|222847639|gb|EEE85186.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  249 bits (637), Expect = 2e-64
 Identities = 134/202 (66%), Positives = 156/202 (77%), Gaps = 1/202 (0%)
 Frame = +2

Query: 32  MAQVVYLGLPFAAQPRKIVAXXXXXXXXXXXXXLPHRTRSTKISIPSSTNGAANHSLKTQ 211
           MAQV+ L + F+A+  K+                 H+ +++  +   +T    +   KTQ
Sbjct: 1   MAQVLSLHVFFSAEIHKVGPSKPLKRI--------HKPKTSLSTRRKATQSPQSPLRKTQ 52

Query: 212 KLNSEVSPHRAVSAVRLMRIEHGGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELNHHD 391
           KLN +VSPHRAVSAVRLMRIE GGAFADLLN+KGKGSG+NEMGYV+RTLGFRT++L+  D
Sbjct: 53  KLNLQVSPHRAVSAVRLMRIEMGGAFADLLNDKGKGSGDNEMGYVERTLGFRTKDLDDRD 112

Query: 392 LRLVTDIVGGTIRWRRYLDHLISSLCHD-KDISSIEPLLLQILRIGFYEIVKLDMPPYAV 568
           LRLVTDIVGGTIRWRRYLD+LI SLCHD K   S+EPLLLQILRIGFYEIVKLDMP YAV
Sbjct: 113 LRLVTDIVGGTIRWRRYLDYLIGSLCHDEKAFRSMEPLLLQILRIGFYEIVKLDMPSYAV 172

Query: 569 VDENVRLAKAALRPGAGNMVNG 634
           VDENVRLAK +LRPGAGNMVNG
Sbjct: 173 VDENVRLAKVSLRPGAGNMVNG 194


>ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methyltransferase B [Vitis
           vinifera] gi|296089930|emb|CBI39749.3| unnamed protein
           product [Vitis vinifera]
          Length = 525

 Score =  248 bits (632), Expect = 9e-64
 Identities = 124/158 (78%), Positives = 139/158 (87%), Gaps = 1/158 (0%)
 Frame = +2

Query: 161 SIPSSTNGAANHSLKTQKLNSEVSPHRAVSAVRLMRIEHGGAFADLLNEKGKGSGENEMG 340
           +IP+ + G   ++ +T  +N E+SPHRAVSAVRLMRIE GGAFADLLNE+GKGSG+NEMG
Sbjct: 34  AIPTRSTGTRRNANRTYGVNLEISPHRAVSAVRLMRIELGGAFADLLNERGKGSGDNEMG 93

Query: 341 YVQRTLGFRTRELNHHDLRLVTDIVGGTIRWRRYLDHLISSLCHD-KDISSIEPLLLQIL 517
           YV+RTLGFRTR+L+  DLRLVTDIVGG+IRWRRYLDHLI SLCHD K   S+EPLLLQIL
Sbjct: 94  YVERTLGFRTRDLDDRDLRLVTDIVGGSIRWRRYLDHLIVSLCHDSKTFRSMEPLLLQIL 153

Query: 518 RIGFYEIVKLDMPPYAVVDENVRLAKAALRPGAGNMVN 631
           RIGFYEIV LDMPPYAVVDENVRLAK ALRPGAGNMVN
Sbjct: 154 RIGFYEIVNLDMPPYAVVDENVRLAKVALRPGAGNMVN 191