BLASTX nr result

ID: Glycyrrhiza24_contig00029899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029899
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542136.1| PREDICTED: ABC transporter C family member 1...   186   1e-45
ref|XP_003637285.1| ABC transporter C family member [Medicago tr...   170   1e-40
ref|XP_002264313.1| PREDICTED: ABC transporter C family member 1...   124   8e-27
ref|XP_002304728.1| multidrug resistance protein ABC transporter...   120   1e-25
ref|XP_002512723.1| multidrug resistance-associated protein, put...   115   5e-24

>ref|XP_003542136.1| PREDICTED: ABC transporter C family member 13-like [Glycine max]
          Length = 1384

 Score =  186 bits (473), Expect = 1e-45
 Identities = 85/103 (82%), Positives = 90/103 (87%)
 Frame = +2

Query: 5   DLEEGGYYDLGNNGNFWDLMTFKFITPVMNHGVVKQLDSEDXXXXXXDMGPSFCHDIMLS 184
           DLEEGGY DLGNNGNFWDLMTFKFITPVMNHGV+KQLD ED      D+GPS CHD++LS
Sbjct: 119 DLEEGGYNDLGNNGNFWDLMTFKFITPVMNHGVIKQLDPEDLLPLPTDIGPSSCHDVILS 178

Query: 185 SWRAQLSNNGSNASLLRALCSAYGWPYLCLGLLKVINDCIGFA 313
            W+AQLSNN SN SL RALCSAYGWPYLCLGLLKVINDCIGFA
Sbjct: 179 CWQAQLSNNDSNPSLFRALCSAYGWPYLCLGLLKVINDCIGFA 221


>ref|XP_003637285.1| ABC transporter C family member [Medicago truncatula]
           gi|355503220|gb|AES84423.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1539

 Score =  170 bits (431), Expect = 1e-40
 Identities = 79/104 (75%), Positives = 87/104 (83%)
 Frame = +2

Query: 2   GDLEEGGYYDLGNNGNFWDLMTFKFITPVMNHGVVKQLDSEDXXXXXXDMGPSFCHDIML 181
           GDLEEGG +DL NN NFWD MTFKFI+PVMN GV+KQLDS+D      DMGPSFCHDI+L
Sbjct: 214 GDLEEGGNHDLENNCNFWDFMTFKFISPVMNQGVLKQLDSDDLLPLLPDMGPSFCHDIIL 273

Query: 182 SSWRAQLSNNGSNASLLRALCSAYGWPYLCLGLLKVINDCIGFA 313
           +SWRAQ+SNN  N SL  ALC+AYGWPYLCLGLLKVIND IGFA
Sbjct: 274 NSWRAQVSNNSLNPSLFSALCNAYGWPYLCLGLLKVINDGIGFA 317


>ref|XP_002264313.1| PREDICTED: ABC transporter C family member 13-like [Vitis vinifera]
          Length = 1305

 Score =  124 bits (311), Expect = 8e-27
 Identities = 58/92 (63%), Positives = 65/92 (70%)
 Frame = +2

Query: 35  GNNGNFWDLMTFKFITPVMNHGVVKQLDSEDXXXXXXDMGPSFCHDIMLSSWRAQLSNNG 214
           G   ++W L+TFK IT VMNHGVVKQLD ED      DM PS CH  +LS W AQ  +N 
Sbjct: 48  GKTQSYWHLLTFKAITSVMNHGVVKQLDFEDLLQLPIDMDPSSCHATLLSCWHAQQRHNC 107

Query: 215 SNASLLRALCSAYGWPYLCLGLLKVINDCIGF 310
           SN SL RA+C AYGWPY  LGLLKV+NDCIGF
Sbjct: 108 SNPSLFRAICCAYGWPYFRLGLLKVVNDCIGF 139


>ref|XP_002304728.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222842160|gb|EEE79707.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1426

 Score =  120 bits (300), Expect = 1e-25
 Identities = 59/103 (57%), Positives = 70/103 (67%)
 Frame = +2

Query: 5   DLEEGGYYDLGNNGNFWDLMTFKFITPVMNHGVVKQLDSEDXXXXXXDMGPSFCHDIMLS 184
           D+EEG + D GN  ++WD MTF+ IT VMNHGV+KQL  +D      DM PS CHD + S
Sbjct: 146 DIEEGFHGDSGNAKSYWDHMTFRTITSVMNHGVIKQLGFDDLLSLPNDMEPSTCHDKLSS 205

Query: 185 SWRAQLSNNGSNASLLRALCSAYGWPYLCLGLLKVINDCIGFA 313
            WR QLS+   N    +A+  AYGWPYLCLGLLKV ND IGFA
Sbjct: 206 CWRVQLSS--PNPFFFKAIFCAYGWPYLCLGLLKVFNDFIGFA 246


>ref|XP_002512723.1| multidrug resistance-associated protein, putative [Ricinus
           communis] gi|223547734|gb|EEF49226.1| multidrug
           resistance-associated protein, putative [Ricinus
           communis]
          Length = 1395

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/103 (54%), Positives = 67/103 (65%)
 Frame = +2

Query: 5   DLEEGGYYDLGNNGNFWDLMTFKFITPVMNHGVVKQLDSEDXXXXXXDMGPSFCHDIMLS 184
           D+E+    D GN  + W+LMTFK ITPVM  G++KQLD ED      DM P  CHD +  
Sbjct: 134 DIEQAYPVDSGNIQSCWNLMTFKSITPVMKRGIIKQLDFEDLLGLPDDMEPLSCHDRLSC 193

Query: 185 SWRAQLSNNGSNASLLRALCSAYGWPYLCLGLLKVINDCIGFA 313
            W+AQ     SN  LL+A+C AYGWPY  +GLLKV NDCIGFA
Sbjct: 194 CWQAQ--QTSSNPLLLKAICCAYGWPYFRIGLLKVFNDCIGFA 234


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