BLASTX nr result

ID: Glycyrrhiza24_contig00029877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029877
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542108.1| PREDICTED: uncharacterized protein LOC547764...   175   3e-42
gb|AAU04625.1| CENP-C [Glycine max]                                   175   3e-42
ref|XP_003546938.1| PREDICTED: uncharacterized protein LOC100778...   169   2e-40
ref|XP_003619785.1| CENP-C [Medicago truncatula] gi|355494800|gb...   164   5e-39
gb|AAU04617.1| CENP-C [Medicago truncatula]                           144   6e-33

>ref|XP_003542108.1| PREDICTED: uncharacterized protein LOC547764 [Glycine max]
          Length = 817

 Score =  175 bits (444), Expect = 3e-42
 Identities = 85/106 (80%), Positives = 93/106 (87%)
 Frame = +1

Query: 7    RRSDDGPEQCLQGKTDGSMVPINGQKKGKLHSRKDSKDKRLQRRQSLAAAGTSWNSGLRR 186
            RRSDD PE CLQ KTDGSMVP+NGQK+ K   +K SK+K+L  R SLAAAGTSW SGLRR
Sbjct: 693  RRSDDDPEHCLQEKTDGSMVPVNGQKRVKSLVQKVSKNKKLSNRHSLAAAGTSWTSGLRR 752

Query: 187  STRIRTRPLEYWKGERLVYGRVHESLATVIGMKCMSPGSDGKPTMK 324
            STRIRTRPLEYWKGERLVYGRVH+SLATVIG+KC+SPGSDGKP MK
Sbjct: 753  STRIRTRPLEYWKGERLVYGRVHKSLATVIGVKCISPGSDGKPIMK 798


>gb|AAU04625.1| CENP-C [Glycine max]
          Length = 170

 Score =  175 bits (444), Expect = 3e-42
 Identities = 85/106 (80%), Positives = 93/106 (87%)
 Frame = +1

Query: 7   RRSDDGPEQCLQGKTDGSMVPINGQKKGKLHSRKDSKDKRLQRRQSLAAAGTSWNSGLRR 186
           RRSDD PE CLQ KTDGSMVP+NGQK+ K   +K SK+K+L  R SLAAAGTSW SGLRR
Sbjct: 46  RRSDDDPEHCLQEKTDGSMVPVNGQKRVKSLVQKVSKNKKLSNRHSLAAAGTSWTSGLRR 105

Query: 187 STRIRTRPLEYWKGERLVYGRVHESLATVIGMKCMSPGSDGKPTMK 324
           STRIRTRPLEYWKGERLVYGRVH+SLATVIG+KC+SPGSDGKP MK
Sbjct: 106 STRIRTRPLEYWKGERLVYGRVHKSLATVIGVKCISPGSDGKPIMK 151


>ref|XP_003546938.1| PREDICTED: uncharacterized protein LOC100778037 [Glycine max]
          Length = 805

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/106 (77%), Positives = 91/106 (85%)
 Frame = +1

Query: 7   RRSDDGPEQCLQGKTDGSMVPINGQKKGKLHSRKDSKDKRLQRRQSLAAAGTSWNSGLRR 186
           R SDD PE CLQ KTDGS+V +NGQK+ K   +K SK+K+L  RQSLAAAGTSW SGLRR
Sbjct: 681 RTSDDDPEHCLQEKTDGSVVAVNGQKRVKSRVQKVSKNKKLSNRQSLAAAGTSWTSGLRR 740

Query: 187 STRIRTRPLEYWKGERLVYGRVHESLATVIGMKCMSPGSDGKPTMK 324
           STRIRTRPLEYWKGER VYGRVH+SLATVIG+KC+SPGSDGKP MK
Sbjct: 741 STRIRTRPLEYWKGERPVYGRVHQSLATVIGVKCISPGSDGKPIMK 786


>ref|XP_003619785.1| CENP-C [Medicago truncatula] gi|355494800|gb|AES76003.1| CENP-C
           [Medicago truncatula]
          Length = 641

 Score =  164 bits (416), Expect = 5e-39
 Identities = 82/107 (76%), Positives = 90/107 (84%)
 Frame = +1

Query: 4   TRRSDDGPEQCLQGKTDGSMVPINGQKKGKLHSRKDSKDKRLQRRQSLAAAGTSWNSGLR 183
           +RRSDDGPEQCLQ KT GS  P+NGQ   K   RK SK KRL R+ SLA AGTSW SG+R
Sbjct: 517 SRRSDDGPEQCLQEKTIGSAAPVNGQTIVKSCMRKGSKGKRLLRK-SLADAGTSWESGVR 575

Query: 184 RSTRIRTRPLEYWKGERLVYGRVHESLATVIGMKCMSPGSDGKPTMK 324
           RSTR RT+PLEYWKGER+VYGRVHESL+TVIG+KCMSPGSDGKPTMK
Sbjct: 576 RSTRFRTKPLEYWKGERMVYGRVHESLSTVIGVKCMSPGSDGKPTMK 622


>gb|AAU04617.1| CENP-C [Medicago truncatula]
          Length = 697

 Score =  144 bits (364), Expect = 6e-33
 Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
 Frame = +1

Query: 10  RSDDGPEQCLQGKTDGSMVPINGQKKGKLHSRKDSKDK-RLQRRQSLAAAGTSWNSGLRR 186
           RS+DGPE  LQ  T GS+ P+NGQK+ K+ ++K SK K R Q R SLA AGTSW SG+RR
Sbjct: 573 RSNDGPELSLQENTVGSVAPVNGQKRVKVCAQKVSKGKKREQHRMSLADAGTSWESGVRR 632

Query: 187 STRIRTRPLEYWKGERLVYGRVHESLATVIGMKCMSPGSDGKPTMK 324
           S R RTRPLEYWKGER+VYGRVHESL+TVIG+K  SPG DGKP MK
Sbjct: 633 SKRFRTRPLEYWKGERMVYGRVHESLSTVIGVKRFSPGGDGKPNMK 678


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